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Report for CCDS34604.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34604.1 Public Homo sapiens 7 AGMO 24 110 108 CCDS HistoryNCBI Gene:392636Re-query CCDS DB by CCDS ID:34604.1Re-query CCDS DB by GeneID:392636See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34604.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342526.8 ENSP00000341662.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000342526.8Link to Ensembl Protein Viewer:ENSP00000341662.3Re-query CCDS DB by Nucleotide ID:ENST00000342526Re-query CCDS DB by Protein ID:ENSP00000341662
Original member Current member NCBI NM_001004320.2 NP_001004320.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004320.2Link to Protein Sequence:NP_001004320.1Re-query CCDS DB by Nucleotide ID:NM_001004320Re-query CCDS DB by Protein ID:NP_001004320Link to BLAST:NP_001004320.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004320.1 445 Q6ZNB7 445 100% 0 0

Chromosomal Locations for CCDS 34604.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 15201285 15201359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15365514 15365619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15366140 15366222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15385446 15385562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15387406 15387540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15390671 15390750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15390840 15390905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15394113 15394179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15418558 15418653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15431005 15431108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15544772 15544923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15560141 15560271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 15561720 15561845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGAAGAACCCAGAAGCCCAGCAGGATGTTTCAGTTTCCCAGGGATTTCGCATGTTGTTTTACACGATGA
AACCCAGTGAAACTTCATTCCAAACATTAGAAGAGGTGCCTGATTATGTAAAAAAGGCAACTCCATTTTT
CATTTCTTTGATGCTGCTTGAACTTGTTGTCAGCTGGATTCTCAAAGGAAAGCCACCAGGTCGCCTGGAT
GATGCTTTAACGTCAATCTCAGCTGGTGTTCTGTCTCGACTTCCAAGTCTATTTTTCAGGAGCATTGAAC
TGACCAGTTATATTTATATCTGGGAGAACTACAGGCTGTTCAATTTGCCTTGGGATTCTCCATGGACTTG
GTATTCAGCCTTCTTAGGAGTTGACTTTGGCTACTACTGGTTCCATCGTATGGCTCATGAAGTTAATATT
ATGTGGGCCGGACACCAAACACATCATAGTTCTGAAGACTATAACTTATCCACAGCACTGAGACAGTCTG
TCCTCCAGATATATACTTCCTGGATTTTCTACTCTCCCCTGGCCCTCTTCATACCCCCTTCAGTATATGC
TGTTCATCTTCAATTCAATCTTCTTTACCAATTTTGGATCCATACAGAGGTCATCAATAACCTTGGTCCT
TTGGAACTGATTCTTAATACTCCTAGCCATCATAGGGTTCATCATGGCAGAAATCGTTATTGCATAGACA
AAAATTATGCTGGTGTTCTTATTATTTGGGATAAAATTTTTGGGACATTTGAAGCAGAAAATGAAAAAGT
TGTATATGGCTTAACACATCCCATTAATACATTTGAACCAATCAAAGTGCAGTTCCATCACTTATTTTCC
ATATGGACTACATTCTGGGCCACACCTGGATTCTTCAATAAGTTTTCTGTCATATTTAAGGGACCGGGAT
GGGGTCCAGGTAAACCAAGACTTGGTCTCAGTGAAGAAATTCCAGAGGTCACCGGCAAAGAAGTTCCCTT
CTCATCATCTTCATCTCAGCTATTAAAGATATATACAGTTGTACAGTTTGCTCTGATGTTGGCATTTTAT
GAAGAGACCTTTGCAGATACAGCTGCACTGTCGCAAGTTACTCTCCTTCTGAGGGTTTGCTTCATTATCC
TGACCTTGACTTCCATTGGATTTCTTCTGGATCAAAGACCCAAGGCAGCTATTATGGAAACTCTCCGTTG
CTTGATGTTCTTAATGCTGTACCGATTTGGTCACCTGAAGCCTCTTGTCCCTTCATTGTCATCTGCTTTT
GAGATTGTTTTTTCCATTTGCATTGCTTTCTGGGGAGTTAGAAGCATGAAACAACTCACCTCTCACCCTT
GGAAATAA

Translation (445 aa):
MKNPEAQQDVSVSQGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLD
DALTSISAGVLSRLPSLFFRSIELTSYIYIWENYRLFNLPWDSPWTWYSAFLGVDFGYYWFHRMAHEVNI
MWAGHQTHHSSEDYNLSTALRQSVLQIYTSWIFYSPLALFIPPSVYAVHLQFNLLYQFWIHTEVINNLGP
LELILNTPSHHRVHHGRNRYCIDKNYAGVLIIWDKIFGTFEAENEKVVYGLTHPINTFEPIKVQFHHLFS
IWTTFWATPGFFNKFSVIFKGPGWGPGKPRLGLSEEIPEVTGKEVPFSSSSSQLLKIYTVVQFALMLAFY
EETFADTAALSQVTLLLRVCFIILTLTSIGFLLDQRPKAAIMETLRCLMFLMLYRFGHLKPLVPSLSSAF
EIVFSICIAFWGVRSMKQLTSHPWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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