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Report for CCDS33635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33635.1 Public Homo sapiens 22 MTFP1 24 110 108 CCDS HistoryNCBI Gene:51537Re-query CCDS DB by CCDS ID:33635.1Re-query CCDS DB by GeneID:51537See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266263.10 ENSP00000266263.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266263.10Link to Ensembl Protein Viewer:ENSP00000266263.5Re-query CCDS DB by Nucleotide ID:ENST00000266263Re-query CCDS DB by Protein ID:ENSP00000266263
Original member Current member NCBI NM_016498.5 NP_057582.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016498.5Link to Protein Sequence:NP_057582.2Re-query CCDS DB by Nucleotide ID:NM_016498Re-query CCDS DB by Protein ID:NP_057582Link to BLAST:NP_057582.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057582.2 166 Q9UDX5-1 166 100% 0 0

Chromosomal Locations for CCDS 33635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 30425880 30425946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30426717 30426844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30427171 30427403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 30428462 30428534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGTCAGAGCCGCAGCCGCGGGGCGCAGAGCGCGATCTCTACCGGGACACGTGGGTGCGATACCTGGGCT
ATGCCAATGAGGTGGGCGAGGCTTTCCGCTCTCTTGTGCCAGCGGCGGTGGTGTGGCTGAGCTATGGCGT
GGCCAGCTCCTACGTGCTGGCGGATGCCATTGACAAAGGCAAGAAGGCTGGAGAGGTGCCCAGCCCTGAA
GCAGGCCGCAGCGCCAGGGTGACTGTGGCTGTGGTGGACACCTTTGTATGGCAGGCTCTAGCCTCTGTGG
CCATTCCGGGCTTCACCATCAACCGCGTGTGTGCTGCCTCTCTCTATGTCCTGGGCACTGCCACCCGCTG
GCCCCTGGCTGTCCGCAAGTGGACCACCACCGCGCTTGGGCTGTTGACCATCCCCATCATTATCCACCCC
ATTGACAGGTCGGTGGATTTCCTCCTGGACTCCAGCCTGCGCAAGCTCTACCCAACAGTGGGGAAGCCCA
GCTCCTCCTGA

Translation (166 aa):
MSEPQPRGAERDLYRDTWVRYLGYANEVGEAFRSLVPAAVVWLSYGVASSYVLADAIDKGKKAGEVPSPE
AGRSARVTVAVVDTFVWQALASVAIPGFTINRVCAASLYVLGTATRWPLAVRKWTTTALGLLTIPIIIHP
IDRSVDFLLDSSLRKLYPTVGKPSSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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