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Report for CCDS33308.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33308.1 Public Homo sapiens 2 CD302 24 110 108 CCDS HistoryNCBI Gene:9936Re-query CCDS DB by CCDS ID:33308.1Re-query CCDS DB by GeneID:9936See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33308.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259053.6 ENSP00000259053.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000259053.6Link to Ensembl Protein Viewer:ENSP00000259053.4Re-query CCDS DB by Nucleotide ID:ENST00000259053Re-query CCDS DB by Protein ID:ENSP00000259053
Original member Current member NCBI NM_014880.5 NP_055695.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014880.5Link to Protein Sequence:NP_055695.2Re-query CCDS DB by Nucleotide ID:NM_014880Re-query CCDS DB by Protein ID:NP_055695Link to BLAST:NP_055695.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055695.2 232 Q8IX05-1 232 100% 0 0

Chromosomal Locations for CCDS 33308.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 159771851 159772053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159777938 159777964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159780005 159780178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159780882 159780998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159783359 159783469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159798132 159798198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (699 nt):
ATGCTCCGGGCCGCGCTGCCCGCGCTCCTGCTGCCGTTGCTGGGCCTCGCCGCTGCTGCCGTCGCGGACT
GTCCTTCATCTACTTGGATTCAGTTCCAAGACAGTTGTTACATTTTTCTCCAAGAAGCCATCAAAGTAGA
AAGCATAGAGGATGTCAGAAATCAGTGTACTGACCATGGAGCGGACATGATAAGCATACATAATGAAGAA
GAAAATGCTTTTATACTGGATACTTTGAAAAAGCAATGGAAAGGCCCAGATGATATCCTACTAGGCATGT
TTTATGACACAGATGATGCGAGTTTCAAGTGGTTTGATAATTCAAATATGACATTTGATAAGTGGACAGA
CCAAGATGATGATGAGGATTTAGTTGACACCTGTGCTTTTCTGCACATCAAGACAGGTGAATGGAAAAAA
GGAAATTGTGAAGTTTCTTCTGTGGAAGGAACACTATGCAAAACAGCTATCCCATACAAAAGGAAATATT
TATCAGATAACCACATTTTAATATCAGCATTGGTGATTGCTAGCACGGTAATTTTGACAGTTTTGGGAGC
AATCATTTGGTTCCTGTACAAAAAACATTCTGATTCTCGTTTCACCACAGTTTTTTCAACCGCACCCCAA
TCACCTTATAATGAAGACTGTGTTTTGGTAGTTGGAGAAGAAAATGAATATCCTGTTCAATTTGACTAA

Translation (232 aa):
MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHGADMISIHNEE
ENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDDDEDLVDTCAFLHIKTGEWKK
GNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQ
SPYNEDCVLVVGEENEYPVQFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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