NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS33217.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33217.1 Public Homo sapiens 2 NFU1 24 110 108 CCDS HistoryNCBI Gene:27247Re-query CCDS DB by CCDS ID:33217.1Re-query CCDS DB by GeneID:27247See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33217.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410022.7 ENSP00000387219.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000410022.7Link to Ensembl Protein Viewer:ENSP00000387219.3Re-query CCDS DB by Nucleotide ID:ENST00000410022Re-query CCDS DB by Protein ID:ENSP00000387219
Original member Current member NCBI NM_001002755.4 NP_001002755.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002755.4Link to Protein Sequence:NP_001002755.1Re-query CCDS DB by Nucleotide ID:NM_001002755Re-query CCDS DB by Protein ID:NP_001002755Link to BLAST:NP_001002755.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002755.1 254 Q9UMS0-1 254 100% 0 0

Chromosomal Locations for CCDS 33217.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 69396246 69396290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69400364 69400538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69406022 69406082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69415185 69415299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69419538 69419604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69423582 69423717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69431902 69432005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69437361 69437422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGGCGGCGACGGCCAGGCGGGGCTGGGGAGCTGCGGCTGTTGCCGCCGGGCTGCGCAGGCGGTTCTGTC
ATATGTTGAAGAATCCATACACCATTAAGAAACAGCCTCTGCATCAGTTTGTACAAAGACCACTTTTCCC
ACTACCTGCAGCCTTTTATCACCCAGTGAGATACATGTTTATTCAAACACAAGATACCCCAAATCCAAAC
AGCTTAAAGTTTATACCAGGAAAACCAGTTCTTGAGACAAGGACCATGGATTTTCCCACCCCAGCTGCAG
CATTTCGCTCCCCTCTGGCTAGGCAGTTATTTAGGATTGAAGGAGTAAAAAGTGTCTTCTTTGGACCAGA
TTTCATCACTGTCACAAAGGAAAATGAAGAATTAGACTGGAATTTACTGAAACCAGATATTTATGCAACA
ATCATGGACTTCTTTGCATCTGGCTTACCCCTGGTTACTGAGGAAACACCTTCAGGAGAAGCAGGATCTG
AAGAAGATGATGAAGTTGTGGCAATGATTAAGGAATTGTTAGATACTAGAATACGGCCAACTGTGCAGGA
AGATGGAGGGGATGTAATCTACAAAGGCTTTGAAGATGGCATTGTACAGCTGAAACTCCAGGGTTCTTGT
ACCAGCTGCCCTAGTTCAATCATTACTCTGAAAAATGGAATTCAGAACATGCTGCAGTTTTATATTCCGG
AGGTAGAAGGCGTAGAACAGGTTATGGATGATGAATCAGATGAAAAAGAAGCAAACTCACCTTAA

Translation (254 aa):
MAATARRGWGAAAVAAGLRRRFCHMLKNPYTIKKQPLHQFVQRPLFPLPAAFYHPVRYMFIQTQDTPNPN
SLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYAT
IMDFFASGLPLVTEETPSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSC
TSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESDEKEANSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH