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Report for CCDS33089.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33089.1 Public Homo sapiens 19 ZNF613 24 110 108 CCDS HistoryNCBI Gene:79898Re-query CCDS DB by CCDS ID:33089.1Re-query CCDS DB by GeneID:79898See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33089.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293471.11 ENSP00000293471.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000293471.11Link to Ensembl Protein Viewer:ENSP00000293471.5Re-query CCDS DB by Nucleotide ID:ENST00000293471Re-query CCDS DB by Protein ID:ENSP00000293471
Original member Current member NCBI NM_001031721.4 NP_001026891.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031721.4Link to Protein Sequence:NP_001026891.2Re-query CCDS DB by Nucleotide ID:NM_001031721Re-query CCDS DB by Protein ID:NP_001026891Link to BLAST:NP_001026891.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026891.2 617 Q6PF04-1 617 100% 0 0

Chromosomal Locations for CCDS 33089.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51936221 51936235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51940209 51940335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51940617 51940709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51944119 51945737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1854 nt):
ATGATCAAGTCCCAGGAATCACTGACCCTGGAGGATGTGGCTGTGGAGTTCACTTGGGAGGAGTGGCAGC
TCCTCGGCCCTGCTCAGAAGGACCTGTACCGAGACGTGATGTTGGAGAACTATAGCAACCTCGTGTCAGT
GGGGTATCAAGCCAGCAAACCAGATGCACTCTTCAAGTTGGAACAAGGAGAGCCATGGACAGTAGAAAAT
GAAATCCACAGCCAAATCTGTCCAGAAATCAAGAAAGTTGACAATCATCTACAGATGCACTCACAAAAGC
AAAGATGTCTGAAGAGAGTGGAACAATGCCATAAACATAATGCATTTGGAAACATCATTCATCAGAGGAA
AAGTGATTTTCCTTTAAGGCAAAATCATGATACATTTGACTTACATGGGAAAATACTGAAATCAAATTTA
AGTTTAGTCAACCAGAACAAAAGGTATGAAATCAAGAATTCTGTGGGGGTTAATGGAGATGGGAAATCCT
TCCTTCATGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCGAAGGTGGAAATTCTGTGAATAC
AAATTCACAATTCATTAAGCATCAGCGAACTCAAAACATAGATAAACCCCATGTATGCACTGAGTGTGGG
AAGGCTTTCCTCAAGAAGTCTCGCCTCATCTATCATCAGAGAGTTCACACTGGGGAGAAACCTCATGGAT
GCAGTATATGTGGGAAAGCCTTCTCCAGAAAGTCCGGGCTCACTGAACACCAGAGAAACCACACAGGAGA
GAAACCCTATGAATGCACTGAATGTGACAAAGCATTCCGCTGGAAATCACAGCTCAATGCACACCAGAAA
ATTCATACAGGAGAGAAGTCATATATATGCAGTGATTGTGGAAAAGGCTTCATCAAGAAGTCTCGGCTCA
TTAATCATCAGAGAGTTCATACAGGAGAGAAACCACATGGATGCAGCCTGTGTGGGAAGGCCTTCTCCAA
AAGGTCCAGGCTCACTGAACACCAGAGAACTCATACAGGAGAGAAACCCTATGAATGCACTGAATGTGAC
AAAGCATTCCGCTGGAAATCACAGCTCAATGCACATCAGAAAGCTCACACAGGAGAGAAGTCATATATAT
GCCGTGATTGTGGAAAAGGCTTCATTCAGAAGGGAAATCTCATTGTACATCAGCGAATTCATACTGGAGA
AAAACCCTATATATGCAATGAATGTGGAAAAGGCTTCATCCAAAAGGGCAACCTCCTTATTCATCGACGT
ACTCACACTGGAGAGAAACCCTATGTATGCAATGAATGTGGGAAAGGCTTCAGCCAGAAGACATGTTTAA
TATCCCATCAGAGATTTCACACAGGAAAGACACCCTTTGTATGTACTGAGTGTGGAAAATCCTGCTCACA
CAAGTCAGGTCTCATTAACCACCAGAGAATTCACACAGGAGAGAAACCCTATACATGCAGTGACTGTGGG
AAAGCTTTCAGAGATAAATCATGTCTCAACAGACATCGGAGAACTCATACAGGGGAGAGACCGTATGGAT
GCTCTGATTGTGGGAAAGCTTTCTCCCACTTGTCATGCCTTGTTTATCATAAGGGAATGCTGCATGCAAG
AGAGAAATGTGTAGGTTCAGTCAAATTGGAAAATCCTTGCTCAGAGAGTCATAGCTTATCACATACACGT
GATCTCATACAGGATAAAGACTCTGTTAACATGGTGACTCTGCAGATGCCTTCTGTGGCAGCTCAGACCT
CATTAACTAACAGTGCGTTCCAAGCAGAGAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTC
AGTCTCAGCAGATAGTAGAATTTGCACAGAATAA

Translation (617 aa):
MIKSQESLTLEDVAVEFTWEEWQLLGPAQKDLYRDVMLENYSNLVSVGYQASKPDALFKLEQGEPWTVEN
EIHSQICPEIKKVDNHLQMHSQKQRCLKRVEQCHKHNAFGNIIHQRKSDFPLRQNHDTFDLHGKILKSNL
SLVNQNKRYEIKNSVGVNGDGKSFLHAKHEQFHNEMNFPEGGNSVNTNSQFIKHQRTQNIDKPHVCTECG
KAFLKKSRLIYHQRVHTGEKPHGCSICGKAFSRKSGLTEHQRNHTGEKPYECTECDKAFRWKSQLNAHQK
IHTGEKSYICSDCGKGFIKKSRLINHQRVHTGEKPHGCSLCGKAFSKRSRLTEHQRTHTGEKPYECTECD
KAFRWKSQLNAHQKAHTGEKSYICRDCGKGFIQKGNLIVHQRIHTGEKPYICNECGKGFIQKGNLLIHRR
THTGEKPYVCNECGKGFSQKTCLISHQRFHTGKTPFVCTECGKSCSHKSGLINHQRIHTGEKPYTCSDCG
KAFRDKSCLNRHRRTHTGERPYGCSDCGKAFSHLSCLVYHKGMLHAREKCVGSVKLENPCSESHSLSHTR
DLIQDKDSVNMVTLQMPSVAAQTSLTNSAFQAESKVAIVSQPVARSSVSADSRICTE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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