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Report for CCDS3253.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3253.1 Public Homo sapiens 3 DVL3 24 110 108 CCDS HistoryNCBI Gene:1857Re-query CCDS DB by CCDS ID:3253.1Re-query CCDS DB by GeneID:1857See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3253.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313143.9 ENSP00000316054.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313143.9Link to Ensembl Protein Viewer:ENSP00000316054.3Re-query CCDS DB by Nucleotide ID:ENST00000313143Re-query CCDS DB by Protein ID:ENSP00000316054
Original member Current member NCBI NM_004423.4 NP_004414.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004423.4Link to Protein Sequence:NP_004414.3Re-query CCDS DB by Nucleotide ID:NM_004423Re-query CCDS DB by Protein ID:NP_004414Link to BLAST:NP_004414.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004414.3 716 Q92997-1 716 100% 0 0

Chromosomal Locations for CCDS 3253.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 184155636 184155796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184163657 184163726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184164267 184164388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184164492 184164601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184164796 184164931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184165113 184165206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184165422 184165491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184166126 184166265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184166446 184166522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184166606 184166673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184166826 184166975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184167580 184167711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184167898 184168065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184170006 184170221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184170319 184170755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGGGCGAGACCAAGATCATCTACCACTTGGATGGGCAGGAGACGCCGTACCTTGTGAAGCTGCCCCTGC
CCGCCGAGCGCGTCACCTTGGCGGACTTTAAGGGCGTTTTGCAGCGACCCAGCTATAAGTTCTTCTTCAA
GTCTATGGACGACGATTTCGGAGTGGTGAAGGAGGAGATCTCGGATGACAATGCCAAGCTACCATGCTTC
AATGGCCGGGTGGTGTCCTGGCTGGTGTCAGCTGAGGGCTCACACCCAGACCCAGCCCCCTTCTGTGCTG
ATAACCCATCGGAGCTGCCACCACCTATGGAGCGCACGGGAGGCATCGGGGACTCCCGACCCCCATCCTT
CCACCCTCATGCTGGTGGGGGCAGCCAGGAGAACCTGGACAATGACACAGAGACGGACTCTTTGGTGTCT
GCCCAGCGAGAGCGGCCACGCCGGAGGGATGGCCCAGAGCATGCAACCCGGCTAAATGGAACTGCGAAGG
GGGAACGGCGGCGAGAACCAGGGGGTTATGATAGCTCATCCACCCTTATGAGCAGTGAGCTGGAGACCAC
CAGCTTCTTTGACTCAGATGAGGATGACTCCACCAGCAGGTTCAGCAGCTCCACAGAACAGAGCAGTGCC
TCACGCCTGATGAGAAGACACAAGCGGCGGCGGCGGAAGCAGAAGGTTTCTCGGATTGAGCGGTCCTCGT
CCTTCAGCAGCATCACGGACTCCACCATGTCACTCAACATCATCACGGTCACTCTCAACATGGAAAAATA
TAACTTCTTGGGCATCTCCATTGTGGGCCAAAGCAACGAGCGTGGTGACGGCGGCATCTACATTGGCTCT
ATCATGAAGGGTGGGGCCGTGGCTGCTGATGGACGCATCGAGCCAGGAGATATGTTGTTACAGGTAAACG
AGATCAACTTTGAGAACATGAGTAATGACGATGCAGTCCGGGTACTGCGGGAGATTGTGCACAAACCGGG
GCCCATCACCCTGACTGTAGCCAAGTGCTGGGACCCAAGTCCACGTGGTTGCTTCACATTGCCCAGGAGC
GAGCCCATCCGGCCCATTGACCCTGCGGCCTGGGTCTCCCACACTGCAGCCATGACCGGCACCTTCCCTG
CATACGGCATGAGCCCCTCCCTGAGCACCATCACCTCCACCAGCTCCTCCATCACCAGTTCCATCCCTGA
CACAGAGCGCCTAGACGACTTCCACTTGTCCATCCACAGTGACATGGCTGCCATCGTAAAAGCCATGGCC
TCCCCTGAATCAGGGTTGGAGGTCCGTGACCGCATGTGGCTCAAGATTACCATCCCTAATGCTTTCATCG
GCTCAGATGTGGTGGACTGGCTGTACCACAATGTGGAAGGCTTCACGGACCGGAGGGAGGCCCGCAAGTA
TGCCAGCAACCTGCTGAAAGCTGGCTTCATCCGCCATACCGTCAACAAGATCACCTTCTCCGAGCAGTGC
TACTACATCTTCGGTGACCTCTGCGGCAACATGGCCAACCTGTCTCTCCACGATCACGATGGCTCCAGTG
GCGCCTCTGACCAGGACACACTGGCCCCTTTGCCGCACCCGGGGGCCGCCCCTTGGCCCATGGCTTTCCC
GTACCAGTACCCGCCACCCCCGCACCCATACAACCCGCACCCGGGCTTCCCGGAGCTGGGCTACAGCTAC
GGCGGGGGCAGCGCCAGCAGTCAGCACAGCGAAGGCAGTCGGAGCAGTGGCTCCAACCGTAGCGGCAGCG
ATCGGAGGAAGGAGAAGGACCCGAAGGCCGGGGACTCCAAGTCCGGGGGCAGCGGCAGCGAATCGGACCA
CACCACACGCAGCAGCCTGCGGGGGCCGCGGGAGCGGGCGCCCAGCGAGCGCTCAGGGCCGGCGGCCAGC
GAGCACAGCCACCGCAGCCACCATTCCCTGGCCAGCAGCCTTCGCAGCCACCACACACACCCGAGCTACG
GTCCTCCCGGAGTGCCCCCTCTCTACGGCCCCCCCATGCTGATGATGCCCCCGCCGCCCGCGGCCATGGG
GCCCCCAGGAGCCCCTCCGGGCCGCGACCTGGCCTCAGTGCCCCCGGAACTGACCGCCAGCAGACAGTCC
TTCCGCATGGCCATGGGAAACCCCAGTGAGTTCTTTGTGGATGTGATGTGA

Translation (716 aa):
MGETKIIYHLDGQETPYLVKLPLPAERVTLADFKGVLQRPSYKFFFKSMDDDFGVVKEEISDDNAKLPCF
NGRVVSWLVSAEGSHPDPAPFCADNPSELPPPMERTGGIGDSRPPSFHPHAGGGSQENLDNDTETDSLVS
AQRERPRRRDGPEHATRLNGTAKGERRREPGGYDSSSTLMSSELETTSFFDSDEDDSTSRFSSSTEQSSA
SRLMRRHKRRRRKQKVSRIERSSSFSSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGS
IMKGGAVAADGRIEPGDMLLQVNEINFENMSNDDAVRVLREIVHKPGPITLTVAKCWDPSPRGCFTLPRS
EPIRPIDPAAWVSHTAAMTGTFPAYGMSPSLSTITSTSSSITSSIPDTERLDDFHLSIHSDMAAIVKAMA
SPESGLEVRDRMWLKITIPNAFIGSDVVDWLYHNVEGFTDRREARKYASNLLKAGFIRHTVNKITFSEQC
YYIFGDLCGNMANLSLHDHDGSSGASDQDTLAPLPHPGAAPWPMAFPYQYPPPPHPYNPHPGFPELGYSY
GGGSASSQHSEGSRSSGSNRSGSDRRKEKDPKAGDSKSGGSGSESDHTTRSSLRGPRERAPSERSGPAAS
EHSHRSHHSLASSLRSHHTHPSYGPPGVPPLYGPPMLMMPPPPAAMGPPGAPPGRDLASVPPELTASRQS
FRMAMGNPSEFFVDVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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