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Report for CCDS32502.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32502.1 Public Homo sapiens 16 ZFPM1 24 110 108 CCDS HistoryNCBI Gene:161882Re-query CCDS DB by CCDS ID:32502.1Re-query CCDS DB by GeneID:161882See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32502.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319555.8 ENSP00000326630.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319555.8Link to Ensembl Protein Viewer:ENSP00000326630.2Re-query CCDS DB by Nucleotide ID:ENST00000319555Re-query CCDS DB by Protein ID:ENSP00000326630
Original member Current member NCBI NM_153813.3 NP_722520.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153813.3Link to Protein Sequence:NP_722520.2Re-query CCDS DB by Nucleotide ID:NM_153813Re-query CCDS DB by Protein ID:NP_722520Link to BLAST:NP_722520.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722520.2 1006 Q8IX07 1006 100% 0 0

Chromosomal Locations for CCDS 32502.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 88453639 88453678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88485939 88486043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88489031 88489153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88514387 88514520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88526814 88526916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88528032 88528238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88532002 88532235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88532614 88532709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88532789 88532935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88533148 88534979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3021 nt):
ATGTCCAGGCGGAAACAGAGCAACCCCCGGCAGATCAAGCGTTCCCTCGGAGACATGGAGGCCAGAGAGG
AGGTGCAGTTGGTGGGTGCCAGCCACATGGAGCAAAAGGCCACGGCACCTGAAGCCCCGAGCCCTCCCAG
CGCAGATGTTAACTCACCCCCACCGCTGCCGCCCCCCACATCCCCAGGAGGCCCCAAGGAGCTGGAAGGA
CAGGAACCAGAACCCAGGCCCACGGAGGAAGAGCCGGGCAGTCCCTGGAGCGGGCCAGACGAGCTGGAGC
CGGTGGTGCAGGATGGGCAGAGGCGCATACGGGCCCGACTCAGCCTCGCCACGGGCCTGTCCTGGGGCCC
GTTCCATGGGAGTGTCCAGACCAGAGCCTCATCCCCCAGGCAGGCGGAGCCGAGCCCAGCCCTGACCCTG
CTGCTGGTGGACGAGGCCTGCTGGCTGAGGACGCTGCCCCAGGCCCTGACTGAGGCCGAGGCCAACACAG
AGATCCACAGGAAGGATGACGCACTCTGGTGCAGGGTCACCAAGCCGGTGCCTGCGGGGGGACTCCTGAG
CGTGCTCCTCACGGCCGAGCCCCACAGCACCCCCGGCCACCCTGTGAAGAAGGAGCCAGCAGAGCCCACG
TGCCCGGCCCCTGCACACGACCTCCAGCTCCTGCCCCAGCAGGCCGGGATGGCCTCCATCCTTGCCACCG
CAGTGATCAACAAAGACGTCTTCCCCTGCAAGGACTGTGGCATCTGGTACCGCAGCGAGCGCAACCTGCA
GGCGCACCTGCTCTACTACTGCGCCAGCCGCCAGGGCACCGGCTCCCCGGCCGCAGCCGCCACAGACGAG
AAGCCCAAAGAGACCTACCCCAACGAGCGCGTCTGCCCCTTCCCCCAGTGCCGCAAGAGCTGCCCCAGCG
CCAGCTCCCTGGAGATCCACATGCGCAGCCACAGCGGAGAGCGGCCCTTCGTGTGCCTGATCTGCCTGTC
GGCCTTCACCACCAAGGCCAACTGCGAGCGGCACCTCAAGGTGCACACGGACACGCTGAGCGGTGTCTGC
CACAGCTGTGGCTTCATCTCCACCACAAGGGACATCCTCTACAGCCACTTGGTCACCAACCACATGGTCT
GCCAGCCTGGCTCCAAGGGTGAGATCTACTCGCCAGGGGCCGGACACCCAGCAACCAAGCTGCCCCCAGA
CAGTCTGGGCAGCTTCCAGCAGCAGCACACGGCCCTGCAAGGCCCCCTGGCCTCCGCGGACCTGGGCCTG
GCGCCCACCCCATCGCCAGGACTGGACAGAAAGGCCCTGGCCGAGGCCACCAACGGAGAGGCCAGAGCGG
AGCCTCTGGCCCAGAATGGAGGCAGCAGCGAGCCCCCGGCGGCCCCCAGGAGCATCAAGGTGGAGGCGGT
GGAGGAGCCGGAGGCGGCCCCCATCCTGGGCCCCGGAGAGCCTGGGCCCCAGGCCCCGTCGCGGACGCCG
TCGCCGCGCAGCCCCGCCCCGGCCAGGGTCAAGGCCGAGCTGTCCAGCCCCACGCCGGGCTCCAGCCCGG
TGCCCGGCGAGCTGGGCCTGGCCGGGGCCCTGTTCCTTCCGCAGTACGTGTTCGGGCCCGACGCGGCGCC
CCCCGCCTCGGAGATCCTGGCCAAGATGTCCGAGCTGGTGCACAGCCGGCTGCAGCAGGGCGCGGGCGCG
GGCGCCGGCGGCGCGCAGACCGGGCTCTTCCCCGGGGCCCCCAAGGGCGCTACGTGCTTCGAGTGCGAGA
TCACCTTCAGCAACGTCAACAACTACTACGTGCACAAGCGCCTCTACTGTTCAGGCCGCCGTGCGCCCGA
GGACGCGCCTGCCGCGCGCAGGCCCAAGGCGCCCCCCGGCCCGGCCCGCGCGCCCCCCGGCCAGCCCGCC
GAACCCGACGCGCCGCGCTCGTCCCCGGGCCCCGGAGCGCGCGAGGAGGGGGCTGGGGGCGCGGCCACGC
CCGAGGACGGCGCGGGCGGCCGGGGCAGCGAGGGCAGCCAGAGCCCGGGTAGCTCCGTGGACGACGCGGA
GGACGACCCCAGCCGCACGCTGTGCGAGGCCTGCAACATCCGCTTCAGCCGCCACGAGACCTACACCGTG
CACAAGCGGTACTACTGCGCCTCGCGCCACGACCCGCCGCCGCGCCGACCGGCCGCGCCCCCGGGACCCC
CTGGGCCGGCCGCGCCCCCGGCCCCCTCTCCCGCCGCGCCTGTGCGCACGCGCAGACGCCGCAAGCTCTA
CGAGCTGCACGCGGCCGGCGCCCCGCCCCCCCCGCCGCCCGGCCACGCCCCCGCGCCCGAGTCGCCGCGG
CCCGGAAGCGGAAGCGGAAGCGGCCCCGGCCTCGCCCCTGCGCGCTCGCCCGGCCCCGCGGCCGACGGCC
CCATCGACCTGAGCAAGAAGCCGCGGCGCCCGCTCCCCGGAGCCCCGGCACCGGCGCTGGCCGACTACCA
CGAGTGCACGGCCTGCCGCGTGAGCTTCCACAGCCTCGAGGCCTACCTGGCGCACAAGAAGTACTCGTGC
CCCGCTGCGCCACCGCCCGGCGCGCTCGGCCTGCCCGCCGCCGCCTGCCCCTACTGCCCCCCGAACGGCC
CGGTGCGCGGGGACCTGCTGGAGCATTTCCGCCTGGCGCACGGCCTGCTGCTCGGCGCGCCCCTGGCCGG
CCCGGGGGTCGAGGCCCGGACGCCGGCCGACCGCGGCCCCTCGCCCGCTCCCGCCCCCGCCGCCTCCCCG
CAGCCCGGGTCCCGTGGCCCCCGGGACGGCCTCGGCCCGGAGCCCCAGGAGCCGCCGCCCGGCCCGCCCC
CGTCCCCGGCCGCCGCGCCCGAGGCCGTGCCGCCCCCGCCGGCGCCCCCCTCCTACTCGGACAAGGGCGT
CCAGACTCCCAGCAAGGGCACGCCGGCGCCGCTGCCCAACGGCAACCACCGGTACTGCCGTCTTTGCAAC
ATCAAGTTCAGCAGCCTGTCCACCTTCATCGCCCACAAGAAGTATTACTGCTCCTCGCACGCCGCCGAGC
ACGTGAAGTGA

Translation (1006 aa):
MSRRKQSNPRQIKRSLGDMEAREEVQLVGASHMEQKATAPEAPSPPSADVNSPPPLPPPTSPGGPKELEG
QEPEPRPTEEEPGSPWSGPDELEPVVQDGQRRIRARLSLATGLSWGPFHGSVQTRASSPRQAEPSPALTL
LLVDEACWLRTLPQALTEAEANTEIHRKDDALWCRVTKPVPAGGLLSVLLTAEPHSTPGHPVKKEPAEPT
CPAPAHDLQLLPQQAGMASILATAVINKDVFPCKDCGIWYRSERNLQAHLLYYCASRQGTGSPAAAATDE
KPKETYPNERVCPFPQCRKSCPSASSLEIHMRSHSGERPFVCLICLSAFTTKANCERHLKVHTDTLSGVC
HSCGFISTTRDILYSHLVTNHMVCQPGSKGEIYSPGAGHPATKLPPDSLGSFQQQHTALQGPLASADLGL
APTPSPGLDRKALAEATNGEARAEPLAQNGGSSEPPAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTP
SPRSPAPARVKAELSSPTPGSSPVPGELGLAGALFLPQYVFGPDAAPPASEILAKMSELVHSRLQQGAGA
GAGGAQTGLFPGAPKGATCFECEITFSNVNNYYVHKRLYCSGRRAPEDAPAARRPKAPPGPARAPPGQPA
EPDAPRSSPGPGAREEGAGGAATPEDGAGGRGSEGSQSPGSSVDDAEDDPSRTLCEACNIRFSRHETYTV
HKRYYCASRHDPPPRRPAAPPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPR
PGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPAPALADYHECTACRVSFHSLEAYLAHKKYSC
PAAPPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGPSPAPAPAASP
QPGSRGPRDGLGPEPQEPPPGPPPSPAAAPEAVPPPPAPPSYSDKGVQTPSKGTPAPLPNGNHRYCRLCN
IKFSSLSTFIAHKKYYCSSHAAEHVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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