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Report for CCDS32469.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32469.1 Public Homo sapiens 16 RANBP10 24 110 108 CCDS HistoryNCBI Gene:57610Re-query CCDS DB by CCDS ID:32469.1Re-query CCDS DB by GeneID:57610See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32469.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317506.8 ENSP00000316589.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317506.8Link to Ensembl Protein Viewer:ENSP00000316589.3Re-query CCDS DB by Nucleotide ID:ENST00000317506Re-query CCDS DB by Protein ID:ENSP00000316589
Original member Current member NCBI NM_020850.3 NP_065901.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020850.3Link to Protein Sequence:NP_065901.1Re-query CCDS DB by Nucleotide ID:NM_020850Re-query CCDS DB by Protein ID:NP_065901Link to BLAST:NP_065901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065901.1 620 Q6VN20-1 620 100% 0 0

Chromosomal Locations for CCDS 32469.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67726428 67726558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67727327 67727438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67727751 67727896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67728390 67728511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67729280 67729484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67729680 67729828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67729938 67730046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67731472 67731584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67734858 67735042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67738013 67738035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67744288 67744455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67772034 67772086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67805428 67805539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67806302 67806536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1863 nt):
ATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGGGCGCTG
GGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAA
CCAGCAAGAGACTCCGCTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAG
GGCAACCTCCGCGTCCACTACAAAGGTCATGGCAAAAATCACAAAGATGCGGCCTCAGTGCGTGCCACCC
ACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATGGTTA
CATGGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAACAGACTTCCTGGTTGGGACAAACATTCCTAT
GGTTACCATGGTGATGATGGGCATTCGTTCTGCTCCTCGGGGACTGGCCAGCCCTATGGTCCCACATTCA
CCACAGGAGACGTGATCGGCTGCTGTGTCAACCTCATCAATGGCACCTGCTTCTACACCAAGAATGGCCA
CAGCCTTGGTATAGCCTTCACAGACCTCCCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCTGGG
GAGATTGTGGACGCCAACTTTGGGCAGCAGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGTGGC
GTGCCAAGGTCCAGGGCACGGTCCACTGCTTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCT
GCAGAACATGGTTTCATCTTACCTCGTGCATCATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATG
ACTGAAACCCCGATTCAGGAAGAACAGGCGTCCATAAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGG
AGGGCCGTGTGGGCGAGGCCATCGAGACCACCCAGCGCTTCTACCCAGGGCTGCTGGAGCACAACCCCAA
CCTCCTCTTCATGCTCAAGTGCCGGCAGTTTGTGGAGATGGTGAATGGGACGGACAGTGAGGTCCGAAGT
TTGAGCTCCCGAAGCCCCAAGTCCCAGGACAGCTACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCC
CCAGTAGTTCCCACATGCACAACACAGGAGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAA
GAGCAAACAGAACCACAGTAAATACCCTGCACCCAGCTCCTCATCCTCGTCCTCCTCCTCCTCCTCGTCC
TCTTCCCCATCCTCCGTCAATTACTCCGAGTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCA
GTACCAGTAACCAGGAGACCAGCGACAGTGAGATGGAGATGGAGGCAGAGCACTACCCCAACGGTGTGCT
AGGAAGCATGTCCACACGCATTGTTAATGGTGCCTACAAGCATGAGGACCTGCAGACGGATGAGTCCAGC
ATGGATGACAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGT
TTGGCCGCGAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGA
GATGCTGCAGGATGCCTTCAGCCTGCTGGCATACTCAGACCCCTGGAGCTGCCCAGTTGGCCAGCAGCTT
GACCCCATCCAGAGGGAACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGAGTCCCAGAACCTGCCAA
AGCAGCCCCCTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCT
GGGTTCTTGCTCCTTTGCCAGAGTTGATGACTACTTGCACTAG

Translation (620 aa):
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQ
GNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSY
GYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPG
EIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARM
TETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRS
LSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS
SSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESS
MDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQL
DPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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