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Report for CCDS32241.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32241.1 Public Homo sapiens 15 TNFAIP8L3 24 110 108 CCDS HistoryNCBI Gene:388121Re-query CCDS DB by CCDS ID:32241.1Re-query CCDS DB by GeneID:388121See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32241.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327536.5 ENSP00000328016.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000327536.5Link to Ensembl Protein Viewer:ENSP00000328016.5Re-query CCDS DB by Nucleotide ID:ENST00000327536Re-query CCDS DB by Protein ID:ENSP00000328016
Original member Current member NCBI NM_207381.4 NP_997264.2 Accepted alive Link to Nucleotide Sequence:NM_207381.4Link to Protein Sequence:NP_997264.2Re-query CCDS DB by Nucleotide ID:NM_207381Re-query CCDS DB by Protein ID:NP_997264Link to BLAST:NP_997264.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997264.2 292 Q5GJ75 292 100% 0 0

Chromosomal Locations for CCDS 32241.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 51057881 51058443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51094544 51094687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51105005 51105176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGGGAAACCACGGCAAAACCCAAGCACACTGGTTTCCACACTCTGTGAGGCAGAGCCAAAGGGGAAAC
TGTGGGTCAACGGATATGCAGGGACCCAAGGCACAAGGGATGCCACGTTACAAACAAGACTCATCCCCTT
ATCTTTTCATCTTCAGAGGGGAAAGGGACTTGCCGCCCCGCTGTCCGCCCTGAGTGCGCCGCGGCTGCCC
GAGCGCCCCGCAGACGGGCGGGTGGCCGTGGACGCCCAGCCAGCAGCCCGCAGCATGGATTCGGATTCCG
GGGAGCAGAGCGAGGGCGAGCCCGTGACCGCCGCAGGTCCTGATGTTTTTAGTTCAAAGAGTCTTGCGCT
TCAAGCCCAGAAGAAGATTCTGAGCAAAATAGCCAGCAAAACTGTGGCCAACATGTTGATTGATGACACC
AGCAGCGAGATCTTTGATGAGCTCTACAAAGTCACCAAAGAGCACACACACAACAAGAAGGAAGCCCACA
AGATCATGAAAGACTTAATCAAGGTGGCGATCAAAATCGGGATCCTCTACCGGAACAACCAGTTTAGCCA
AGAGGAGCTGGTTATTGTGGAGAAGTTCCGGAAGAAGCTGAACCAGACCGCCATGACCATTGTCAGCTTC
TATGAGGTGGAATACACCTTCGATAGGAACGTGCTCTCCAATCTCCTGCATGAGTGCAAGGACCTGGTGC
ATGAACTGGTGCAGCGGCACCTGACGCCCAGGACCCACGGGCGCATCAACCACGTCTTTAACCACTTTGC
CGATGTGGAGTTCCTCTCCACCCTCTATAGTCTGGATGGAGACTGTAGGCCCAACCTCAAGAGGATTTGT
GAAGGAATCAATAAGTTGCTAGATGAGAAAGTCCTTTAA

Translation (292 aa):
MGKPRQNPSTLVSTLCEAEPKGKLWVNGYAGTQGTRDATLQTRLIPLSFHLQRGKGLAAPLSALSAPRLP
ERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQKKILSKIASKTVANMLIDDT
SSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSF
YEVEYTFDRNVLSNLLHECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRIC
EGINKLLDEKVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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