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Report for CCDS31499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31499.1 Public Homo sapiens 11 OR4A16 24 110 108 CCDS HistoryNCBI Gene:81327Re-query CCDS DB by CCDS ID:31499.1Re-query CCDS DB by GeneID:81327See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31499.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314721.5 ENSP00000325128.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314721.5Link to Ensembl Protein Viewer:ENSP00000325128.2Re-query CCDS DB by Nucleotide ID:ENST00000314721Re-query CCDS DB by Protein ID:ENSP00000325128
Original member Current member NCBI NM_001005274.1 NP_001005274.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005274.1Link to Protein Sequence:NP_001005274.1Re-query CCDS DB by Nucleotide ID:NM_001005274Re-query CCDS DB by Protein ID:NP_001005274Link to BLAST:NP_001005274.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005274.1 328 Q8NH70 328 100% 0 0

Chromosomal Locations for CCDS 31499.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55343201 55344187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGAGACCAAGCAGCAATGTTACAGAATTTGTCCTCCTGGGCCTCACTCAAGATCCTGATGTGAAAAAAA
CATTATTTGTCATGTTTTTACTCATATACATTGTGACAATGGTGGGAAACCTCCTCATTTGGGTGACTAC
TATTGGCAGCCCCTCCTTGGGCTCCCTAATGTACTTCTTCCTTGCCTACTTGTCACTTATGGATGCCATA
TATTCCACTGCCATGTCACCCAAATTGATGATAGACTTACTCTGTGATAAAATCGCTATTTCCTTGTCAG
CTTGCATGGGTCAGCTCTTCATAGAACACTTACTTGGTGGTGCAGAGGTCTTCCTTTTGGTGGTGATGGC
CTATGATCGCTATGTGGCTATCTCTAAGCCGCTGCACTATTTGAACATCATGAATCGACTGGTTTGCATC
CTTCTGTTGGTGGTGGCCATGATTGGAGGTTTTGTGCACTCTGTGGTTCAAATTGTCTTTCTGTACAGTC
TACCAATCTGTGGCCCCAATGTTATTGACCACTCTGTCTGTGACATGTACCCATTGTTGGAACTGTTGTG
CCTTGACACCTACTTTATAGGACTCACTGTGGTTGCCAATGGTGGAATAATTTGTATGGTCATCTTTACC
TTTCTGCTAATCTCCTGTGGAGTCATCCTAAACTTCCTTAAAACTTACAGTCAGGAAGAGAGGCATAAAG
CCCTGCCTACCTGCATCTCCCACATCATTGTGGTTGCCCTCGTTTTTGTTCCCTGTATTTTTATGTATGT
TAGACCCGTTTCCAACTTTCCCTTTGATAAATTAATGACTGTGTTTTATTCAATTATCACACTCATGTTG
AATCCTTTAATATACTCGTTGAGACAATCAGAGATGAAAAATGCTATGAAAAATCTCTGGTGTGAAAAGT
TAAGTATAGTTAGAAAAAGAGTATCTCCCACACTGAACATATTTATTCCTAGTTCTAAGGCAACAAATAG
GCGGTAA

Translation (328 aa):
MRPSSNVTEFVLLGLTQDPDVKKTLFVMFLLIYIVTMVGNLLIWVTTIGSPSLGSLMYFFLAYLSLMDAI
YSTAMSPKLMIDLLCDKIAISLSACMGQLFIEHLLGGAEVFLLVVMAYDRYVAISKPLHYLNIMNRLVCI
LLLVVAMIGGFVHSVVQIVFLYSLPICGPNVIDHSVCDMYPLLELLCLDTYFIGLTVVANGGIICMVIFT
FLLISCGVILNFLKTYSQEERHKALPTCISHIIVVALVFVPCIFMYVRPVSNFPFDKLMTVFYSIITLML
NPLIYSLRQSEMKNAMKNLWCEKLSIVRKRVSPTLNIFIPSSKATNRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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