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Report for CCDS30901.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30901.1 Public Homo sapiens 1 OR10Z1 24 110 108 CCDS HistoryNCBI Gene:128368Re-query CCDS DB by CCDS ID:30901.1Re-query CCDS DB by GeneID:128368See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30901.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641002.1 ENSP00000493003.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641002.1Link to Ensembl Protein Viewer:ENSP00000493003.1Re-query CCDS DB by Nucleotide ID:ENST00000641002Re-query CCDS DB by Protein ID:ENSP00000493003
Original member Current member NCBI NM_001004478.2 NP_001004478.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004478.2Link to Protein Sequence:NP_001004478.1Re-query CCDS DB by Nucleotide ID:NM_001004478Re-query CCDS DB by Protein ID:NP_001004478Link to BLAST:NP_001004478.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004478.1 313 Q8NGY1 313 100% 0 0

Chromosomal Locations for CCDS 30901.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 158606439 158607380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGGGCAGACCAACGTAACCTCCTGGAGGGATTTTGTCTTCCTGGGCTTCTCCAGTTCTGGGGAGTTGC
AGCTCCTTCTCTTTGCCTTGTTCCTCTCTCTGTATCTAGTCACTCTGACCAGCAATGTCTTCATTATCAT
AGCCATCAGGCTGGATAGCCATCTGCACACCCCCATGTACCTCTTCCTTTCCTTCCTATCCTTCTCTGAG
ACCTGCTACACTTTGGGCATCATCCCTAGAATGCTCTCTGGCCTGGCTGGGGGGGACCAGGCTATCTCCT
ATGTGGGCTGTGCTGCCCAGATGTTCTTTTCTGCCTCATGGGCCTGTACTAACTGCTTCCTTCTGGCTGC
CATGGGCTTTGACAGATATGTGGCCATCTGTGCTCCACTCCACTATGCCAGCCACATGAATCCTACCCTC
TGTGCCCAGCTGGTCATTACTTCCTTCCTGACTGGATACCTCTTTGGACTGGGAATGACACTAGTTATTT
TCCACCTCTCATTCTGCAGCTCCCATGAAATCCAGCACTTTTTTTGTGACACGCCACCTGTGCTGAGCCT
AGCCTGTGGAGATACAGGCCCGAGTGAGCTGAGGATCTTTATCCTCAGTCTTTTGGTCCTCTTGGTCTCC
TTCTTCTTCATCACCATCTCCTACGCCTACATCTTGGCAGCAATACTGAGGATCCCCTCTGCTGAGGGGC
AGAAGAAGGCCTTCTCCACTTGTGCCTCGCACCTTACAGTGGTCATTATTCATTATGGCTGTGCTTCCTT
CGTGTACCTGAGGCCCAAAGCCAGCTACTCTCTTGAGAGAGATCAGCTTATTGCCATGACCTATACTGTA
GTGACCCCCCTCCTTAATCCCATTGTTTATAGTCTAAGGAATAGGGCTATACAGACAGCTCTGAGGAATG
CTTTCAGAGGGAGATTGCTGGGTAAAGGATGA

Translation (313 aa):
MGQTNVTSWRDFVFLGFSSSGELQLLLFALFLSLYLVTLTSNVFIIIAIRLDSHLHTPMYLFLSFLSFSE
TCYTLGIIPRMLSGLAGGDQAISYVGCAAQMFFSASWACTNCFLLAAMGFDRYVAICAPLHYASHMNPTL
CAQLVITSFLTGYLFGLGMTLVIFHLSFCSSHEIQHFFCDTPPVLSLACGDTGPSELRIFILSLLVLLVS
FFFITISYAYILAAILRIPSAEGQKKAFSTCASHLTVVIIHYGCASFVYLRPKASYSLERDQLIAMTYTV
VTPLLNPIVYSLRNRAIQTALRNAFRGRLLGKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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