NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS30769.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30769.2 Public Homo sapiens 1 HFM1 24 110 108 CCDS HistoryNCBI Gene:164045Re-query CCDS DB by CCDS ID:30769.2Re-query CCDS DB by GeneID:164045See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 30769.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370425.8 ENSP00000359454.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370425.8Link to Ensembl Protein Viewer:ENSP00000359454.3Re-query CCDS DB by Nucleotide ID:ENST00000370425Re-query CCDS DB by Protein ID:ENSP00000359454
Original member Current member NCBI NM_001017975.6 NP_001017975.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001017975.6Link to Protein Sequence:NP_001017975.5Re-query CCDS DB by Nucleotide ID:NM_001017975Re-query CCDS DB by Protein ID:NP_001017975Link to BLAST:NP_001017975.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017975.5 1435 A2PYH4-1 1435 100% 0 0

Chromosomal Locations for CCDS 30769.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 91261290 91261359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91262241 91262392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91262481 91262592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91266017 91266107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91267745 91267855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91273712 91273815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91274730 91274809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91276628 91276743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91276982 91277062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91313349 91313495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91313957 91314060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91315815 91315972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91316101 91316184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91316391 91316476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91319078 91319209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91319293 91319390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91322950 91322997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91323093 91323199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91324675 91324766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91343430 91343510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91347429 91347476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91350738 91350871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91351549 91351643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91352506 91352651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91353051 91353152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91353256 91353299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91375358 91375446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91375527 91375727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91378025 91378183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91378403 91378480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91379063 91379214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91380104 91380236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91380912 91380982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91385187 91385234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91385575 91385834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91394093 91394402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91396293 91396405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91401012 91401082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4308 nt):
ATGCTGAAATCAAATGATTGCCTGTTTTCTTTGGAAAATTTGTTTTTTGAAAAACCAGATGAAGTTGAAA
ACCATCCAGACAATGAAAAGTCATTGGATTGGTTTCTCCCTCCTGCTCCATTGATTTCAGAAATTCCAGA
TACTCAGGAGTTAGAGGAAGAATTAGAAAGTCATAAACTGTTAGGTCAGGAAAAGAGGCCAAAAATGTTA
ACATCAAATTTAAAGATAACTAATGAAGATACAAATTATATTTCACTAACACAAAAATTCCAGTTTGCCT
TTCCTTCTGATAAATATGAACAGGATGATCTAAATTTAGAAGGGGTAGGTAATAATGACTTATCACATAT
TGCTGGCAAGCTGACATATGCTTCTCAGAAATATAAAAATCACATTGGCACTGAGATAGCACCTGAGAAG
AGTGTTCCTGATGATACAAAATTAGTTAATTTTGCAGAAGATAAAGGAGAGAGCACATCAGTATTCCGGA
AAAGATTATTTAAAATATCTGACAATATACATGGGAGTGCTTATTCTAATGACAATGAATTGGACTCTCA
CATTGGCTCAGTGAAAATTGTACAAACAGAAATGAACAAAGGGAAATCAAGGAACTATAGCAATAGTAAG
CAAAAATTTCAGTATTCTGCAAATGTGTTTACAGCAAATAATGCTTTTTCTGCTTCTGAAATCGGAGAAG
GCATGTTCAAAGCACCATCTTTTTCAGTTGCTTTCCAACCTCATGATATTCAAGAGGTAACAGAAAATGG
TTTAGGTTCCTTGAAGGCTGTCACAGAAATTCCGGCAAAATTTAGAAGTATTTTCAAAGAATTTCCATAT
TTCAACTATATACAGTCCAAGGCCTTTGATGATCTTCTTTACACAGATAGGAATTTTGTGATTTGTGCTC
CAACTGGTTCTGGAAAAACTGTAGTGTTTGAACTAGCTATAACAAGATTGTTAATGGAAGTACCATTGCC
ATGGTTGAATATTAAAATTGTTTACATGGCACCAATAAAAGCCTTGTGCAGTCAGCGTTTTGATGACTGG
AAAGAAAAATTTGGACCAATAGGATTGAATTGTAAAGAACTTACTGGAGATACAGTAATGGATGATCTAT
TTGAGATTCAGCATGCCCATATTATTATGACAACTCCAGAAAAATGGGATAGCATGACTAGGAAATGGAG
AGACAACTCTTTGGTTCAGCTGGTTCGACTGTTTCTCATTGATGAGGTACATATTGTAAAAGATGAAAAT
CGTGGTCCAACTCTTGAAGTTGTAGTTAGCAGAATGAAAACTGTACAGTCTGTTTCTCAGACTTTAAAAA
ATACCAGCACTGCTATTCCAATGCGATTTGTAGCTGTATCTGCAACAATTCCAAATGCTGAGGATATTGC
AGAATGGCTTTCAGATGGTGAAAGACCAGCTGTGTGTCTGAAAATGGATGAGAGCCATAGACCAGTGAAA
CTTCAGAAAGTGGTCCTTGGATTTCCCTGCAGTAGTAACCAAACTGAGTTTAAGTTTGATTTAACCCTCA
ACTACAAAATTGCCAGTGTTATACAAATGTACTCTGATCAGAAACCCACACTTGTGTTTTGTGCAACAAG
GAAGGGTGTGCAACAGGCTGCTTCTGTTCTTGTGAAAGATGCTAAATTTATTATGACTGTGGAACAGAAA
CAGAGGTTACAGAAGTATGCATATTCCGTAAGAGATTCAAAACTGAGAGATATCTTAAAAGATGGTGCTG
CTTATCATCATGCTGGTATGGAGCTGTCAGATAGAAAAGTAGTTGAGGGAGCTTTTACTGTTGGAGATTT
ACCAGTTCTTTTTACTACCAGTACTTTAGCTATGGGAGTAAATTTGCCTGCTCACCTAGTAGTTATAAAA
TCTACAATGCATTATGCTGGAGGACTGTTTGAAGAGTACAGTGAAACAGATATTCTACAGATGATTGGTA
GAGCTGGTCGACCTCAATTTGACACTACAGCTACTGCAGTTATCATGACTCGATTAAGCACAAGGGACAA
GTACATTCAGATGTTAGCTTGTAGAGACACTGTAGAAAGCAGTTTGCACAGACATCTTATTGAACATTTA
AATGCAGAGATAGTACTGCATACCATCACGGATGTGAATATTGCTGTGGAATGGATACGATCAACTCTGC
TTTATATCAGAGCCTTGAAAAATCCATCTCATTATGGTTTTGCATCTGGATTGAACAAAGATGGAATTGA
AGCAAAATTACAAGAATTATGTTTGAAGAATCTGAATGATTTATCATCCCTGGACTTAATAAAGATGGAT
GAAGGTGTTAATTTCAAACCAACTGAAGCAGGAAGATTGATGGCTTGGTATTATATTACATTTGAGACAG
TGAAGAAATTTTATACAATCAGTGGAAAAGAAACCTTATCAGATCTGGTTACATTGATAGCTGGCTGCAA
GGAATTTCTAGATATACAGTTAAGGATAAATGAAAAGAAAACACTGAATACTTTGAACAAAGATCCAAAT
CGGATAACTATCAGATTTCCAATGGAAGGAAGAATTAAAACAAGAGAAATGAAAGTAAATTGTCTTATTC
AGGCTCAACTAGGATGCATTCCCATACAAGATTTTGCTTTGACACAAGATACCGCAAAGATTTTCAGACA
TGGCTCCCGAATTACAAGATGGTTGTCAGATTTTGTAGCTGCTCAAGAAAAGAAGTTTGCTGTACTATTG
AATAGTTTGATTTTAGCTAAATGTTTTAGGTGTAAACTTTGGGAAAACTCTCTGCATGTATCCAAACAAC
TGGAAAAAATTGGTATAACATTGTCAAATGCAATCGTAAATGCTGGTTTGACTTCCTTTAAAAAAATAGA
AGAGACAGATGCAAGGGAACTTGAATTGATTTTAAACAGACATCCCCCCTTTGGAACCCAGATAAAAGAA
ACTGTGATGTATCTACCAAAATATGAACTTAAAGTGGAACAGATTACAAGATATAGTGATACGACGGCAG
AAATATTAGTGACTGTTATATTAAGAAATTTTGAACAGCTACAAACTAAAAGAACAGCATCGGATTCTCA
CTATGTTACCTTAATCATAGGTGACGCAGATAATCAAGTAGTTTATCTGCACAAGATTACGGATTCTGTT
TTGCTAAAAGCTGGAAGTTGGGCTAAAAAGATTGCTGTGAAAAGAGCTCTTAAATCTGAAGATCTTAGCA
TAAATCTAATAAGTTCTGAATTTGTTGGGCTTGATATTCAGCAGAAACTTACAGTCTTTTACTTAGAACC
CAAGAGGTTTGGAAATCAAATCACTATGCAAAGAAAATCTGAAACACAGATTTCCCATTCTAAACATTCA
GACATATCTACAATAGCAGGACCTAATAAAGGAACGACTGCCAGCAAAAAACCTGGGAACCGAGAATGCA
ATCATCTTTGTAAAAGTAAACATACATGTGGACATGACTGCTGTAAAATTGGAGTTGCACAGAAGTCAGA
AATTAAAGAGTCAACAATTTCTTCATATTTATCTGATTTAAGAAACAGGAATGCTGTTTCATCTGTTCCT
CCAGTTAAACGTCTGAAGATACAGATGAATAAATCTCAAAGTGTGGACCTTAAAGAGTTTGGTTTTACTC
CAAAACCTTCCCTTCCTAGTATATCAAGGTCAGAATATTTAAACATATCTGAATTGCCTATAATGGAGCA
GTGGGATCAGCCTGAAATCTATGGAAAAGTTAGACAAGAACCATCTGAATATCAAGACAAAGAAGTTTTG
AATGTGAACTTTGAATTGGGAAATGAAGTTTGGGATGATTTTGATGATGAAAACTTAGAAGTTACTAGCT
TTTCAACTGATACTGAGAAGACAAAAATATCAGGATTTGGAAACACTTTGAGTTCAAGTACCAGGGGAAG
TAAGCTACCCCTTCAAGAGTCAAAGAGCAAATTCCAAAGAGAAATGTCAAACAGTTTTGTTTCATCACAT
GAGATGTCGGATATTTCTTTATCAAATTCTGCTATGCCCAAGTTCAGTGCATCCTCCATGACAAAATTAC
CTCAACAAGCCGGAAATGCAGTTATTGTCCATTTTCAAGAAAGAAAACCACAAAATCTGTCACCAGAGAT
TGAGAAGCAATGCTTTACTTTCTCTGAAAAAAACCCAAATTCTTCAAATTATAAAAAAGTGGATTTTTTT
ATTAGAAACAGTGAATGTAAAAAGGAAGTTGATTTCAGTATGTATCATCCTGATGATGAAGCTGATGAAA
TGAAGTCTTTATTGGGAATATTTGATGGTATTTTCTAA

Translation (1435 aa):
MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKML
TSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEK
SVPDDTKLVNFAEDKGESTSVFRKRLFKISDNIHGSAYSNDNELDSHIGSVKIVQTEMNKGKSRNYSNSK
QKFQYSANVFTANNAFSASEIGEGMFKAPSFSVAFQPHDIQEVTENGLGSLKAVTEIPAKFRSIFKEFPY
FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDDW
KEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHIVKDEN
RGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVK
LQKVVLGFPCSSNQTEFKFDLTLNYKIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQK
QRLQKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIK
STMHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSLHRHLIEHL
NAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLIKMD
EGVNFKPTEAGRLMAWYYITFETVKKFYTISGKETLSDLVTLIAGCKEFLDIQLRINEKKTLNTLNKDPN
RITIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAVLL
NSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDARELELILNRHPPFGTQIKE
TVMYLPKYELKVEQITRYSDTTAEILVTVILRNFEQLQTKRTASDSHYVTLIIGDADNQVVYLHKITDSV
LLKAGSWAKKIAVKRALKSEDLSINLISSEFVGLDIQQKLTVFYLEPKRFGNQITMQRKSETQISHSKHS
DISTIAGPNKGTTASKKPGNRECNHLCKSKHTCGHDCCKIGVAQKSEIKESTISSYLSDLRNRNAVSSVP
PVKRLKIQMNKSQSVDLKEFGFTPKPSLPSISRSEYLNISELPIMEQWDQPEIYGKVRQEPSEYQDKEVL
NVNFELGNEVWDDFDDENLEVTSFSTDTEKTKISGFGNTLSSSTRGSKLPLQESKSKFQREMSNSFVSSH
EMSDISLSNSAMPKFSASSMTKLPQQAGNAVIVHFQERKPQNLSPEIEKQCFTFSEKNPNSSNYKKVDFF
IRNSECKKEVDFSMYHPDDEADEMKSLLGIFDGIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH