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Report for CCDS30509.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30509.1 Public Mus musculus X Rbbp7 23 108 98 CCDS HistoryNCBI Gene:245688Re-query CCDS DB by CCDS ID:30509.1Re-query CCDS DB by GeneID:245688See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30509.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033720.11 ENSMUSP00000033720.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033720.11Link to Ensembl Protein Viewer:ENSMUSP00000033720.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033720Re-query CCDS DB by Protein ID:ENSMUSP00000033720
Original member Current member NCBI NM_009031.3 NP_033057.3 Accepted alive Link to Nucleotide Sequence:NM_009031.3Link to Protein Sequence:NP_033057.3Re-query CCDS DB by Nucleotide ID:NM_009031Re-query CCDS DB by Protein ID:NP_033057Link to BLAST:NP_033057.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033057.3 425 Q60973 425 100% 0 0

Chromosomal Locations for CCDS 30509.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 162760692 162760707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162761575 162761719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162768852 162768997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162769764 162769937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162771053 162771168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162772205 162772365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162773196 162773322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162773441 162773518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162774553 162774629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162775736 162775793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162777772 162777882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 162778348 162778416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGCGAGTAAAGAGATGTTTGAAGATACTGTGGAGGAGCGTGTCATCAACGAAGAGTATAAAATCTGGA
AGAAGAATACACCGTTTCTGTATGACCTGGTTATGACCCATGCTCTTCAGTGGCCCAGTCTTACCGTTCA
GTGGCTTCCTGAAGTGACTAAACCAGAAGGAAAGGATTATGCCCTTCATTGGCTAGTGCTGGGCACTCAT
ACATCTGATGAGCAGAACCATCTGGTGGTTGCTCGAGTTCATATTCCCAATGATGATGCACAGTTTGATG
CTTCCCACTGTGACAGTGACAAGGGAGAATTCGGTGGCTTTGGTTCTGTAACAGGGAAAATTGAATGTGA
AATTAAAATTAACCATGAAGGAGAAGTGAATCGTGCTCGTTATATGCCACAGAATCCTCACATCATTGCC
ACAAAAACACCATCTTCTGATGTTTTGGTTTTTGACTATACAAAACACCCTGCAAAACCAGATCCAAGTG
GAGAATGTAATCCTGATCTTAGATTAAGAGGTCACCAAAAGGAAGGCTATGGTCTTTCCTGGAATTCTAA
TCTGAGTGGGCATCTCCTGAGTGCATCTGATGACCATACTGTCTGCCTGTGGGATATAAATGCAGGACCA
AAGGAAGGCAAAATTGTGGATGCTAAAGCAATCTTTACTGGCCACTCAGCTGTTGTAGAGGATGTGGCCT
GGCATCTGCTGCATGAGTCCTTGTTTGGATCTGTTGCTGATGATCAGAAACTTATGATATGGGACACCAG
ATCCAATACCACTTCTAAGCCGAGCCATTTGGTGGATGCACACACCGCTGAGGTCAACTGCCTCTCATTC
AATCCCTACAGCGAGTTCATTCTGGCAACTGGCTCTGCAGATAAGACTGTAGCTTTATGGGACCTGCGTA
ATCTGAAACTAAAACTCCACACCTTTGAATCGCATAAGGATGAAATTTTCCAGGTCCACTGGTCTCCACA
TAATGAAACTATTCTGGCCTCAAGTGGTACTGATCGCCGCCTGAATGTGTGGGATTTAAGTAAAATTGGA
GAAGAACAATCAGCAGAAGATGCAGAAGATGGGCCTCCAGAGCTCCTGTTTATTCATGGAGGGCACACTG
CCAAGATTTCTGACTTCAGCTGGAATCCCAATGAACCTTGGGTCATTTGCTCTGTGTCTGAAGATAACAT
CATGCAGATATGGCAGATGGCTGAAAATATTTACAATGATGAAGAGTCAGATGTCACGGCATCGGAACTG
GAGGGGCAAGGATCTTAA

Translation (425 aa):
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTH
TSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIA
TKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP
KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF
NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG
EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL
EGQGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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