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Report for CCDS30329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30329.1 Public Mus musculus X Zcchc13 23 108 98 CCDS HistoryNCBI Gene:75064Re-query CCDS DB by CCDS ID:30329.1Re-query CCDS DB by GeneID:75064See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30329.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033692.8 ENSMUSP00000033692.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033692.8Link to Ensembl Protein Viewer:ENSMUSP00000033692.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033692Re-query CCDS DB by Protein ID:ENSMUSP00000033692
Original member NCBI NM_029158.2 NP_083434.1 Updated not alive Link to Nucleotide Sequence:NM_029158.2Link to Protein Sequence:NP_083434.1Re-query CCDS DB by Nucleotide ID:NM_029158Re-query CCDS DB by Protein ID:NP_083434
Current member NCBI NM_029158.3 NP_083434.1 Accepted alive Link to Nucleotide Sequence:NM_029158.3Link to Protein Sequence:NP_083434.1Re-query CCDS DB by Nucleotide ID:NM_029158Re-query CCDS DB by Protein ID:NP_083434Link to BLAST:NP_083434.1

Chromosomal Locations for CCDS 30329.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103630673 103631185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGAGCAGTAAAAGTTGCTTCAAGTGTGGACACTCTGGCCACTGGGCCCGGGAGTGTCCTAAGGGAGGAA
CCCGAGGGCGAACAGCAAGAGGTCGTACCAGAGGTCCCCAGTGCAGCACCGCCAACCAGTCCGATGTTTG
TTATCGCTGTGGTGAAACTGGTCACTACGCCAAGGACTGTGATCTTCTCCAGGATACCTGCTACAACTGC
GGGAGAAGAGGACACATAGCTAAGGACTGTACCCAGGCTAAACGAGAGAGGGAGCAGTGCTGTTACATCT
GCAGTCAGCCTGGTCATCTGGCTCGGGACTGCAACCGGCAAGAAGAACAGAAATGCTACACTTGTGGTGA
ATTTGGGCACATCCAGAAAGATTGTACCCAAATTAAGTGCTACAGATGTGGTGAGAATGGCCACATGGCG
GTGAACTGCAGCAAGACGAGCGAAGTCAGCTGCTACCGCTGTGGAGAGTCTGGACATCTGGCTCGGGAAT
GCCCCATTGAGGCTACCGCTTAG

Translation (170 aa):
MSSKSCFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDCDLLQDTCYNC
GRRGHIAKDCTQAKREREQCCYICSQPGHLARDCNRQEEQKCYTCGEFGHIQKDCTQIKCYRCGENGHMA
VNCSKTSEVSCYRCGESGHLARECPIEATA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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