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Report for CCDS30192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30192.1 Public Mus musculus X Pnma3 23 108 98 CCDS HistoryNCBI Gene:245468Re-query CCDS DB by CCDS ID:30192.1Re-query CCDS DB by GeneID:245468See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060418.7 ENSMUSP00000054177.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060418.7Link to Ensembl Protein Viewer:ENSMUSP00000054177.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000060418Re-query CCDS DB by Protein ID:ENSMUSP00000054177
Original member Current member NCBI NM_153169.2 NP_694809.1 Accepted alive Link to Nucleotide Sequence:NM_153169.2Link to Protein Sequence:NP_694809.1Re-query CCDS DB by Nucleotide ID:NM_153169Re-query CCDS DB by Protein ID:NP_694809Link to BLAST:NP_694809.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694809.1 466 Q8JZW8 466 100% 0 0

Chromosomal Locations for CCDS 30192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 73064822 73066222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGCCATTGAACCTGTTGCAAGACTGGTGTAGGGGGGAGCATCTGAACACCCAGAGGTCTATGCTGATCC
TGGGGATTCCAGAGGACTGTAGTGAGGATGAGTTTGAGGAGACTCTGCACGAAGCTCTCAAGCATCTGGG
AAGATACAGGATCATCGGCAGGATGTTTAGGAGGGAGGAAAATGCCCAGGCCTTTTTGGTGGAACTTGCA
CGTGATTTTGACTATGCTTTGGTGCCCAGGGAAATAGAAGGAAAGGGTGGGCCCTGGGAAGTGGTTGTAA
AACCCCCTCATTCAGATGATGAATTTCTTAATAGACTGAATCACTTCTTAGAAGAGGAGAGGAGAACAGT
GTCAGACATGAACAGGGTCCTTGGGACACACTCTAATCATTCACCTACCAAAACGACTATATCAGCAGAT
TTCTGGGTCTGGGCTCAGACTCTAGGTGCAGTGATGCAGCCTCTGCTAGAACAAATGTTGTACCGAGAAC
TAAGAGTCTTTTCTGGGAACACCATATCAATCCCAGGGTTATTGGCCTTCGATTCCTGGCTTGAACACAC
CACTGAGATGTTACAGATGTGGCAGGTACCTGAGGTAGAAAAGAGGCGGAGGCTGATGGAATGCTTAAGA
GGCCCTGCTCTACAGGTTGTCAATGTGCTCCGTGCCAATAACGCTGCCATTACAGTGAAGGAGTGCCTGG
AGGCCCTGCGGCAGGTATTTGGCTCTGTGGACAACCGAAAAATCGCCCAGCTGAAGTTTTGCAAGGCTTA
TCAGGAGCCAGGAGAGAAAGTTTCTAGCTTTGTGGTGCGTTTGGAGACCCTGCTCCAAAAAGCCCTAGAG
AAAAATGCAATATCTCGAAAGAATGTGAACCAGACCCGCCTGAAACGAATTTTAGGTGGGGCTATCCTTT
CTGCAAAACTTCGAGAGAAACTTAAGATGCTGAAACAGCGTAGAAGGCCACCTGGTTTCCTGGCCCTAGT
GAAGCTTTTCCGTGAGGAGGAGGAAGAGTGGGAGGCCACTAGGGGTTCAGAGAGGAGCTGCTATGAGGGG
CTGGAGTTAGGCCCAAGTCCCTCTAACATAGGCAGTGAGGAGAGAGAACTATTTGTTCCGGCCTTTGGTA
GTGTTCTTGAGGAAAGGCCTTACCAGGGTTCCCGCCGCCGCCGCCACAGGAGGAGAGGCCAGCACAGAAA
GGGAGGTGTGCCCAGGGATGATTCTCAAGGCACAAGAAAGCAGAATTATGACACATTCTGCTATAGTTGT
GGGGAAGATGGCCATATCAGAGTACACTGTTTTAACCCTTCCAACCGGACCTTGGTGAAACAGAAGAGAC
AGGCTGCAATGGAGAAGGGAAACAGGAGCTGGGCTTGGGAGAAGAGCCATCCCAAGCCCAAGACCAAGTA
G

Translation (466 aa):
MPLNLLQDWCRGEHLNTQRSMLILGIPEDCSEDEFEETLHEALKHLGRYRIIGRMFRREENAQAFLVELA
RDFDYALVPREIEGKGGPWEVVVKPPHSDDEFLNRLNHFLEEERRTVSDMNRVLGTHSNHSPTKTTISAD
FWVWAQTLGAVMQPLLEQMLYRELRVFSGNTISIPGLLAFDSWLEHTTEMLQMWQVPEVEKRRRLMECLR
GPALQVVNVLRANNAAITVKECLEALRQVFGSVDNRKIAQLKFCKAYQEPGEKVSSFVVRLETLLQKALE
KNAISRKNVNQTRLKRILGGAILSAKLREKLKMLKQRRRPPGFLALVKLFREEEEEWEATRGSERSCYEG
LELGPSPSNIGSEERELFVPAFGSVLEERPYQGSRRRRHRRRGQHRKGGVPRDDSQGTRKQNYDTFCYSC
GEDGHIRVHCFNPSNRTLVKQKRQAAMEKGNRSWAWEKSHPKPKTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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