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Report for CCDS29919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29919.1 Public Mus musculus 19 Adrb1 23 108 98 CCDS HistoryNCBI Gene:11554Re-query CCDS DB by CCDS ID:29919.1Re-query CCDS DB by GeneID:11554See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29919.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038949.5 ENSMUSP00000040847.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038949.5Link to Ensembl Protein Viewer:ENSMUSP00000040847.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000038949Re-query CCDS DB by Protein ID:ENSMUSP00000040847
Original member Current member NCBI NM_007419.3 NP_031445.2 Accepted alive Link to Nucleotide Sequence:NM_007419.3Link to Protein Sequence:NP_031445.2Re-query CCDS DB by Nucleotide ID:NM_007419Re-query CCDS DB by Protein ID:NP_031445Link to BLAST:NP_031445.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031445.2 466 P34971 466 100% 0 0

Chromosomal Locations for CCDS 29919.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 56722372 56723772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGGGCGCGGGGGCGCTCGCCCTGGGCGCCTCCGAACCCTGCAACCTGTCGTCCGCCGCGCCGCTGCCCG
ACGGTGCGGCCACCGCGGCGCGGCTGCTGGTGCTCGCGTCGCCTCCCGCCTCGCTGCTGCCTCCAGCCAG
CGAGGGCTCAGCGCCGCTGTCGCAGCAGTGGACCGCGGGTATGGGCCTACTGCTGGCGCTCATCGTTCTG
CTCATCGTGGTGGGTAACGTGCTGGTGATCGTGGCCATCGCCAAGACCCCGCGGCTGCAGACGCTCACCA
ACCTCTTCATCATGTCCCTGGCCAGCGCTGATCTGGTCATGGGATTGCTGGTGGTGCCTTTCGGGGCCAC
CATCGTGGTGTGGGGCCGCTGGGAGTACGGCTCCTTCTTCTGCGAGCTCTGGACTTCGGTAGATGTGCTG
TGTGTGACGGCCAGCATTGAGACCCTGTGTGTCATCGCCCTGGACCGCTACCTCGCCATCACGTCGCCCT
TTCGCTACCAGAGTTTGCTGACGCGCGCGCGAGCGCGGGCCCTCGTGTGCACAGTGTGGGCCATCTCGGC
GTTGGTGTCCTTCCTGCCCATCCTCATGCACTGGTGGCGGGCCGAGAGCGACGAAGCGCGCCGCTGCTAC
AACGACCCCAAGTGCTGCGATTTCGTCACCAACAGGGCCTACGCCATCGCCTCGTCCGTCGTCTCCTTCT
ACGTGCCCCTGTGCATCATGGCCTTCGTGTACCTGCGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAA
GATCGACAGCTGCGAGCGCCGCTTCCTCGGCGGCCCAGCCCGGCCGCCCTCGCCTGAGCCCTCGCCGTCA
CCTGGGCCACCGCGCCCCGCAGACTCGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGCGCCTCG
TGGCTCTGCGCGAGCAGAAGGCGCTCAAGACACTGGGCATCATCATGGGTGTGTTCACGCTCTGCTGGCT
GCCCTTCTTCCTGGCCAACGTGGTGAAGGCTTTCCACCGCGACCTGGTGCCGGATCGCCTCTTCGTCTTC
TTCAACTGGCTGGGCTACGCCAACTCGGCCTTCAACCCCATCATCTACTGCCGCAGCCCCGACTTCCGCA
AGGCTTTCCAGCGCCTGCTCTGCTGCGCGCGCCGGGCCGCCTGCAGACGCCGCGCAGCCCACGGGGACCG
GCCGCGCGCCTCCGGCTGCCTGGCGAGAGCTGGGCCGCCGCCGTCCCCCGGAGCTCCCTCGGACGACGAC
GACGACGACGCCGGGACCACCCCACCGGCGCGCCTGCTGGAGCCCTGGACCGGCTGCAACGGCGGGACAA
CCACTGTGGACAGCGATTCGAGCCTGGACGAGCCGGGGCGCCAGGGCTTCTCCTCGGAGTCCAAGGTGTA
G

Translation (466 aa):
MGAGALALGASEPCNLSSAAPLPDGAATAARLLVLASPPASLLPPASEGSAPLSQQWTAGMGLLLALIVL
LIVVGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVL
CVTASIETLCVIALDRYLAITSPFRYQSLLTRARARALVCTVWAISALVSFLPILMHWWRAESDEARRCY
NDPKCCDFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQKQVKKIDSCERRFLGGPARPPSPEPSPS
PGPPRPADSLANGRSSKRRPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRDLVPDRLFVF
FNWLGYANSAFNPIIYCRSPDFRKAFQRLLCCARRAACRRRAAHGDRPRASGCLARAGPPPSPGAPSDDD
DDDAGTTPPARLLEPWTGCNGGTTTVDSDSSLDEPGRQGFSSESKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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