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Report for CCDS29758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29758.1 Public Mus musculus 19 Fas 23 108 98 CCDS HistoryNCBI Gene:14102Re-query CCDS DB by CCDS ID:29758.1Re-query CCDS DB by GeneID:14102See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29758.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025691.12 ENSMUSP00000025691.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025691.12Link to Ensembl Protein Viewer:ENSMUSP00000025691.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000025691Re-query CCDS DB by Protein ID:ENSMUSP00000025691
Original member Current member NCBI NM_007987.2 NP_032013.2 Accepted alive Link to Nucleotide Sequence:NM_007987.2Link to Protein Sequence:NP_032013.2Re-query CCDS DB by Nucleotide ID:NM_007987Re-query CCDS DB by Protein ID:NP_032013Link to BLAST:NP_032013.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032013.2 327 P25446 327 100% 0 0

Chromosomal Locations for CCDS 29758.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 34290715 34290744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34307125 34307278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34315179 34315316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34316569 34316677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34318590 34318651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34318783 34318836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34319310 34319389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34320561 34320585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 34326993 34327324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGCTGTGGATCTGGGCTGTCCTGCCTCTGGTGCTTGCTGGCTCACAGTTAAGAGTTCATACTCAAGGTA
CTAATAGCATCTCCGAGAGTTTAAAGCTGAGGAGGCGGGTTCGTGAAACTGATAAAAACTGCTCAGAAGG
ATTATATCAAGGAGGCCCATTTTGCTGTCAACCATGCCAACCTGGTAAAAAAAAAGTTGAGGACTGCAAA
ATGAATGGGGGTACACCAACCTGCGCCCCATGCACAGAAGGGAAGGAGTACATGGACAAGAACCATTATG
CTGATAAATGCAGAAGATGCACACTCTGCGATGAAGAGCATGGTTTAGAGGTGGAAACAAACTGCACCCT
GACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCGATTCTCCTGGCTGTGAACACTGTGTT
CGCTGCGCCTCGTGTGAACATGGAACCCTTGAGCCGTGCACAGCAACCAGCAATACAAACTGCAGGAAAC
AAAGTCCCAGAAATCGCCTATGGTTGTTGACCATCCTTGTTTTGTTAATTCCACTTGTATTTATATATCG
AAAGTACCGGAAAAGAAAGTGCTGGAAAAGGAGACAGGATGACCCTGAATCTAGAACCTCCAGTCGTGAA
ACCATACCAATGAATGCCTCAAATCTTAGCTTGAGTAAATACATCCCGAGAATTGCTGAAGACATGACAA
TCCAGGAAGCTAAAAAATTTGCTCGAGAAAATAACATCAAGGAGGGCAAGATAGATGAGATCATGCATGA
CAGCATCCAAGACACAGCTGAGCAGAAAGTCCAGCTGCTCCTGTGCTGGTACCAATCTCATGGGAAGAGT
GATGCATATCAAGATTTAATCAAGGGTCTCAAAAAAGCCGAATGTCGCAGAACCTTAGATAAATTTCAGG
ACATGGTCCAGAAGGACCTTGGAAAATCAACCCCAGACACTGGAAATGAAAATGAAGGACAATGTCTGGA
GTGA

Translation (327 aa):
MLWIWAVLPLVLAGSQLRVHTQGTNSISESLKLRRRVRETDKNCSEGLYQGGPFCCQPCQPGKKKVEDCK
MNGGTPTCAPCTEGKEYMDKNHYADKCRRCTLCDEEHGLEVETNCTLTQNTKCKCKPDFYCDSPGCEHCV
RCASCEHGTLEPCTATSNTNCRKQSPRNRLWLLTILVLLIPLVFIYRKYRKRKCWKRRQDDPESRTSSRE
TIPMNASNLSLSKYIPRIAEDMTIQEAKKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKS
DAYQDLIKGLKKAECRRTLDKFQDMVQKDLGKSTPDTGNENEGQCLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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