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Report for CCDS29541.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29541.1 Public Mus musculus 19 Wdr74 23 108 98 CCDS HistoryNCBI Gene:107071Re-query CCDS DB by CCDS ID:29541.1Re-query CCDS DB by GeneID:107071See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29541.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049424.10 ENSMUSP00000043315.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049424.10Link to Ensembl Protein Viewer:ENSMUSP00000043315.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000049424Re-query CCDS DB by Protein ID:ENSMUSP00000043315
Original member Current member NCBI NM_134139.1 NP_598900.1 Accepted alive Link to Nucleotide Sequence:NM_134139.1Link to Protein Sequence:NP_598900.1Re-query CCDS DB by Nucleotide ID:NM_134139Re-query CCDS DB by Protein ID:NP_598900Link to BLAST:NP_598900.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598900.1 384 Q8VCG3 384 100% 0 0

Chromosomal Locations for CCDS 29541.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 8735842 8735905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8735987 8736093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8736176 8736297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8737654 8737729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8737848 8737994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8738153 8738254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8739266 8739366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8739447 8739502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8739819 8739964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8740096 8740152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 8740402 8740578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGCGACTGCCTCGGCTCGCTGGAACCATGTGTGGGTCGGCACTGAGACCGGCATCCTGAAAGGGGTGA
ACCTTCAGCGGAAACATGCGGCAAATTTCACACCGTCCGGACAGCCGCGGCGGGAGGAGGCAGTGAATGC
TCTGTGCTGGGGCACTGGCGGCGAGACCCAAATCTTGGTGGGCTGTGCGGACAGAACCGTGAGGTACTTT
AATGCTGAGGAGGGTACATTCCTGAGCCAGAGATACTGCCCAGGCGGGGAAGGCACGTTCCGAGGTCTCG
CCCAGGCGGATGGCACCCTTATCACATGTGTGGATTCTGGGATCCTCAGAGTCTGGTGTGAAAATGACAA
AGAGGCGTCCTCTGACCCACTCTTGGAACTGAAGGTGGGTCCTGGGGTGTGTAGGATGCGCCAAGATCCC
ACACATACACATGTGGTTGCCACATGTGGGAAAGAAAATGCTTTGAAAGTATGGGACCTACAGGGGTCTG
AGGAGCCTGTATTCAGGGCCAAAAATGTGCGGAATGATTGGCTTGATCTCCGAGTTCCTATTTGGGACCA
AGATACACAGTTCCTCCCTGGGTCACAGAAACTTGTCACATGCACAGGGTACCACCAGGTCCGTGTCTAT
GATCCAGTCTCCCCCCAGCGCCGGCCAGTCCTAGAGGCCACCTATGGAGAGTACCCACTGACAGCTATGA
CCCTTACTCCTGAGGGCAATTCCGTCATCGTAGGGAACACTCATGGGCAGCTGGCAGAAATTGATTTTCG
GCAAGGGCGTCTACTGGGCTGTCTGAAGGGGCTTGCAGGTAGTGTTCGTGGGCTGCAGTGTCACCCTTCA
AAGCCCCTATTAGCCTCATGTGGCTTGGACAGAGTCTTGAGGATACACAGGATCCGCAATCCACGTGGGC
TAGAGCATAAGGTTTATCTCAAGTCTCAACTGAACTGCCTTCTCCTGTCAGGCCGGGATAACTGGGAGGA
TGAGCCCCAAGAACCTCAAGAGCCCAACCAAGTACCCTCAGAAGACACAGAGACAGATGAACTTTGGGCC
TCTTTGGAGGCAGCTGCCAAGCGGAAGCTCCCAGATTTGGACCAGACACAAGGTGCTCTCCAAAGAAGGA
AGAAAAAGAAGCGGCCTGGATCCACCAGTCCTTGA

Translation (384 aa):
MATASARWNHVWVGTETGILKGVNLQRKHAANFTPSGQPRREEAVNALCWGTGGETQILVGCADRTVRYF
NAEEGTFLSQRYCPGGEGTFRGLAQADGTLITCVDSGILRVWCENDKEASSDPLLELKVGPGVCRMRQDP
THTHVVATCGKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFLPGSQKLVTCTGYHQVRVY
DPVSPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKGLAGSVRGLQCHPS
KPLLASCGLDRVLRIHRIRNPRGLEHKVYLKSQLNCLLLSGRDNWEDEPQEPQEPNQVPSEDTETDELWA
SLEAAAKRKLPDLDQTQGALQRRKKKKRPGSTSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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