NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS28802.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28802.1 Public Mus musculus 17 Enpp5 23 108 98 CCDS HistoryNCBI Gene:83965Re-query CCDS DB by CCDS ID:28802.1Re-query CCDS DB by GeneID:83965See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28802.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024756.4 ENSMUSP00000024756.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024756.4Link to Ensembl Protein Viewer:ENSMUSP00000024756.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000024756Re-query CCDS DB by Protein ID:ENSMUSP00000024756
Original member Current member EBI ENSMUST00000154166.7 ENSMUSP00000122767.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000154166.7Link to Ensembl Protein Viewer:ENSMUSP00000122767.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000154166Re-query CCDS DB by Protein ID:ENSMUSP00000122767
Original member Current member NCBI NM_001168620.2 NP_001162091.1 Accepted alive Link to Nucleotide Sequence:NM_001168620.2Link to Protein Sequence:NP_001162091.1Re-query CCDS DB by Nucleotide ID:NM_001168620Re-query CCDS DB by Protein ID:NP_001162091Link to BLAST:NP_001162091.1
Original member Current member NCBI NM_032003.3 NP_114392.1 Accepted alive Link to Nucleotide Sequence:NM_032003.3Link to Protein Sequence:NP_114392.1Re-query CCDS DB by Nucleotide ID:NM_032003Re-query CCDS DB by Protein ID:NP_114392Link to BLAST:NP_114392.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001162091.1 477 Q9EQG7 477 100% 0 0
NP_114392.1 477 Q9EQG7 477 100% 0 0

Chromosomal Locations for CCDS 28802.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44080682 44081510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44082744 44082920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44085205 44085632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGATTCCAGAGTTTCTCCTTGCGTCTTGCACACTGGCTACTCTATGCCATTCGGCTCCGTTTTCTCTAC
AGCCAGAAGAGCAGAAAGTTCTGGTAGTTTCTTTTGATGGATTCCGCTGGGATTACTTATATAAAGTTCC
AACCCCTCATTTCCATTATATCATGAAAAATGGTGTCCATGTGAACCAAGTCACTAATGTTTTCATCACA
AAGACCTACCCTAACCATTACACTTTGGTCACTGGTCTCTTTGCAGAGAATCATGGGATTGTTGCAAATG
ACATGTTCGACCCTATTCTGAACAAGTCCTTCTCCTTGGAGCACATGGATATTTATGATTCTAAGTTTTG
GGAAGAAGCCACACCAATATGGATCACAAACCAGAGGGCAGGGCATGCTAGTGGCGCGGCCATGTGGCCC
GGAGCAGATGTGAAGATCCACGATAGTTTCCCGACCTATTATCTACCTTACAATGAGTCTGTTTCCTTTG
AAGACAGAGTTGCCAAAATCATTGAGTGGTTTACAGCCAAAGATCCCATCAATCTCGGTTTCCTCTACTG
GGAAGAACCCGATGACACGGGCCATGATGTGGGACCTGACAGTCCTCTCATGGGGTCTGTTATTTCTGAT
GTTGACCACAAGTTAGGGTATCTGATAAAGATGCTGAAAAGGGCAAAGTTGTGGAATAATGTTAACCTCA
TCGTCACGAGCGACCATGGGATGACCCAGTGCTCTAAGCAAAGGGTGATAGAACTTGACCGCTACCTGGA
CAAAGAGCACTACACCTTGATTGATCACTCACCTGTAGCTGCCATCCTGCCAAAAGAAGGTAAATTTGAT
GAAGTCTATGATGCGCTGGCCGGTGCCCATCCTAATCTAACGGTCTATAAAAAGGAGGAGATACCAGAAA
GATGGCATTACAAGCACAATGACAGAGTTCAACCAATCGTAGCTGTGGCCGATGAAGGGTGGTATATTTT
GCAGAATAAGTCAGATGATTTTCTGTTAGGCAACCATGGTTATGATAATGCATTAGCAGAAATGCATCCA
ATATTTTTAGCCCACGGTCCTGCCTTCAGAAAGAATTTCACAAAAGAAGCCATGAACTCCACAGATCTGT
ACTCACTGCTCTGCCACCTCCTCAATCTCACCGCCCTGCCACACAATGGATCATTCTGGAATGTCCAGGA
CCTTCTCAGTTCAGCAACTCCCAAGCCAATTCCTTACACACAGAGTACCACACTCCTCCTTGGGAGTGAC
AAACCAGGGGAGGATGAGCAAGAGGAATCGTACCCTTATTACATAGGTGTCTCTCTTGGCAGCATCATAG
CTATGGTATTCTTTGTAGTTCTCATTAAGCATTTAATACGCAGTCAAGTGCATACTTTACAATATAGGCA
GGTCGAAGTTGCTCAACCGTTACTCCAAGCTTAG

Translation (477 aa):
MIPEFLLASCTLATLCHSAPFSLQPEEQKVLVVSFDGFRWDYLYKVPTPHFHYIMKNGVHVNQVTNVFIT
KTYPNHYTLVTGLFAENHGIVANDMFDPILNKSFSLEHMDIYDSKFWEEATPIWITNQRAGHASGAAMWP
GADVKIHDSFPTYYLPYNESVSFEDRVAKIIEWFTAKDPINLGFLYWEEPDDTGHDVGPDSPLMGSVISD
VDHKLGYLIKMLKRAKLWNNVNLIVTSDHGMTQCSKQRVIELDRYLDKEHYTLIDHSPVAAILPKEGKFD
EVYDALAGAHPNLTVYKKEEIPERWHYKHNDRVQPIVAVADEGWYILQNKSDDFLLGNHGYDNALAEMHP
IFLAHGPAFRKNFTKEAMNSTDLYSLLCHLLNLTALPHNGSFWNVQDLLSSATPKPIPYTQSTTLLLGSD
KPGEDEQEESYPYYIGVSLGSIIAMVFFVVLIKHLIRSQVHTLQYRQVEVAQPLLQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH