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Report for CCDS27750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27750.1 Public Mus musculus 15 Chkb 23 108 98 CCDS HistoryNCBI Gene:12651Re-query CCDS DB by CCDS ID:27750.1Re-query CCDS DB by GeneID:12651See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27750.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023289.12 ENSMUSP00000023289.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023289.12Link to Ensembl Protein Viewer:ENSMUSP00000023289.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000023289Re-query CCDS DB by Protein ID:ENSMUSP00000023289
Original member Current member NCBI NM_007692.6 NP_031718.1 Accepted alive Link to Nucleotide Sequence:NM_007692.6Link to Protein Sequence:NP_031718.1Re-query CCDS DB by Nucleotide ID:NM_007692Re-query CCDS DB by Protein ID:NP_031718Link to BLAST:NP_031718.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031718.1 394 O55229 394 100% 0 0

Chromosomal Locations for CCDS 27750.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89426590 89426661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89426811 89426892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89427324 89427427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89427561 89427669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89427792 89427873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89427957 89428015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89428134 89428229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89428411 89428544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89428714 89428827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89429049 89429157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89429377 89429600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGGCGGCAGACGGGACAGGGGTAGTCGGAGGAGGGGCTGTCGGCGGCGGCCTGCCCAAGGACGGTTTGC
AGGATGCTAAGTGCCCAGAGCCAATCCCCAATCGGCGGCGCGCTTCCTCGCTGTCCCGTGACGCGCAGCG
CCGAGCCTATCAGTGGTGCCGGGAGTACCTGGGCGGGGCCTGGCGCCGAGCGCGGCCGGAGGAGCTGAGC
GTTTGTCCCGTGAGCGGAGGCCTCAGCAACCTGCTCTTCCGATGCTCACTACCGAACCACGTACCCAGTG
TGGGCGGGGAGCCCCGGGAGGTGCTGCTACGACTCTACGGGGCCATCCTGCAGGGTGTAGACTCCTTGGT
ATTAGAAAGCGTGATGTTCGCCATTCTCGCAGAGCGGTCTCTAGGGCCCCAGCTTTACGGAGTGTTTCCA
GAGGGCCGCTTGGAACAGTACCTCCCAAGCCGGCCGTTGAAAACTCAAGAGCTCCGGGACCCAGTGTTGT
CGGGAGCCATTGCAACGAGGATGGCCCGTTTCCATGGTATGGAGATGCCCTTCACTAAGGAGCCCCGATG
GTTGTTTGGGACCATGGAGCGGTACCTGAAGCAGATCCAGGACTTGCCTTCCACCAGCCTTCCCCAGATG
AACCTGGTAGAGATGTACAGCCTCAAGGACGAGATGAACAGCCTCAGGAAGTTACTAGACGATACCCCGT
CACCAGTGGTCTTCTGCCACAATGACATCCAGGAAGGAAACATCTTGTTGCTTTCAGAGCCAGACAGTGA
TGATAACCTCATGTTGGTTGATTTTGAGTACAGTAGTTATAACTACAGGGGCTTTGACATTGGGAATCAT
TTTTGTGAGTGGGTTTATGATTATACTTATGAAGAATGGCCTTTCTACAAAGCAAGACCCACGGACTACC
CCACTAGAGAACAGCAGCTCCATTTTATTCGCCATTATCTGGCAGAGGTTCAGAAGGGTGAGATCCTCTC
CGAAGAGGAACAGAAGAAACGGGAAGAAGAATTGCTGCTAGAGATCAGTCGGTACTCCCTGGCATCTCAC
TTTTTCTGGGGTCTGTGGTCCACCCTGCAGGCTTCGATGTCCACTATAGAGTTCGGCTACTTGGAGTATG
CCCAATCTCGGTTCCAGTTCTACTTCCAGCAGAAGGGCCAGCTGACGAGTTCCCCATCATCCTGA

Translation (394 aa):
MAADGTGVVGGGAVGGGLPKDGLQDAKCPEPIPNRRRASSLSRDAQRRAYQWCREYLGGAWRRARPEELS
VCPVSGGLSNLLFRCSLPNHVPSVGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP
EGRLEQYLPSRPLKTQELRDPVLSGAIATRMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQM
NLVEMYSLKDEMNSLRKLLDDTPSPVVFCHNDIQEGNILLLSEPDSDDNLMLVDFEYSSYNYRGFDIGNH
FCEWVYDYTYEEWPFYKARPTDYPTREQQLHFIRHYLAEVQKGEILSEEEQKKREEELLLEISRYSLASH
FFWGLWSTLQASMSTIEFGYLEYAQSRFQFYFQQKGQLTSSPSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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