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Report for CCDS27689.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27689.1 Public Mus musculus 15 Ndufa6 23 108 98 CCDS HistoryNCBI Gene:67130Re-query CCDS DB by CCDS ID:27689.1Re-query CCDS DB by GeneID:67130See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27689.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023085.6 ENSMUSP00000023085.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023085.6Link to Ensembl Protein Viewer:ENSMUSP00000023085.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000023085Re-query CCDS DB by Protein ID:ENSMUSP00000023085
Original member NCBI NM_025987.3 NP_080263.1 Updated not alive Link to Nucleotide Sequence:NM_025987.3Link to Protein Sequence:NP_080263.1Re-query CCDS DB by Nucleotide ID:NM_025987Re-query CCDS DB by Protein ID:NP_080263
Current member NCBI NM_025987.4 NP_080263.1 Accepted alive Link to Nucleotide Sequence:NM_025987.4Link to Protein Sequence:NP_080263.1Re-query CCDS DB by Nucleotide ID:NM_025987Re-query CCDS DB by Protein ID:NP_080263Link to BLAST:NP_080263.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080263.1 131 Q9CQZ5 131 100% 0 0

Chromosomal Locations for CCDS 27689.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82350240 82350371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82350979 82351094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82354081 82354228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGGCGGCCGCGGCCACCGGCCTGCGCCAAGCTGCTGCTGCGGCAGCCAGTACCTCGGTGAAGCCCATTT
TCAGTCGCGACCTGAACGAGGCCAAGCGGAGGGTGCGCGAGCTCTACCGCGCTTGGTATCGGGAGGTGCC
GAACACCGTGCACTTAATGCAGCTGGATATCACGGTGAAACAAGGACGGGATAAAGTCCGAGAAATGTTC
ATGAAGAATGCCCATGTCACAGACCCCAGAGTGGTTGATCTGCTGGTCATTAAGGGAAAGATGGAGCTCC
AGGAAACCATCAAAGTATGGAAGCAGCGGACACACGTTATGCGGTTTTTCCATGAAACAGAAACACCAAG
GCCAAAGGATTTCTTATCTAAGTTCTATATGGGCCATGACCCATGA

Translation (131 aa):
MAAAATGLRQAAAAAASTSVKPIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLDITVKQGRDKVREMF
MKNAHVTDPRVVDLLVIKGKMELQETIKVWKQRTHVMRFFHETETPRPKDFLSKFYMGHDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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