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Report for CCDS27527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27527.1 Public Mus musculus 15 Them6 23 108 98 CCDS HistoryNCBI Gene:223626Re-query CCDS DB by CCDS ID:27527.1Re-query CCDS DB by GeneID:223626See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27527.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070923.2 ENSMUSP00000069692.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070923.2Link to Ensembl Protein Viewer:ENSMUSP00000069692.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000070923Re-query CCDS DB by Protein ID:ENSMUSP00000069692
Original member Current member NCBI NM_198607.1 NP_941009.1 Accepted alive Link to Nucleotide Sequence:NM_198607.1Link to Protein Sequence:NP_941009.1Re-query CCDS DB by Nucleotide ID:NM_198607Re-query CCDS DB by Protein ID:NP_941009Link to BLAST:NP_941009.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941009.1 207 Q80ZW2 207 100% 0 0

Chromosomal Locations for CCDS 27527.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74721295 74721807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74723460 74723570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGCTGGAGCTGTTGGTGGCGTCGTTATCCCTGGCGCTCGCCTTCTTTGCGCTGCTGGACGGCTGGTACC
TGGTGCGCGTGCCGTGTGCTGTTCTGCGCGCACGCTTGCTGCAGCCGCGGGTCCGCGACTTATTGGCGGA
GCAGCGGTATGCCGGCCGGGTGCTGCCATCGGACCTGGACCTGCTGCTACACATGAACAACGCGCGCTAC
CTGCGCGAGGCGGATGTGGCGCGCGCTGCGCACCTGACCCGCTGCGGTGTGCTGGGGGCGCTGCGCGACC
TGAACGCGCACACGGTGCTGGCCGCCTCGTGCGCGCGCTATCGCCGCTCGCTGCGCCTGTTTGAGCCGTT
CGAGGTACACACGCGACTGCAAGGCTGGGACGACCGCGCCTTCTACCTGGAGGCGCGTTTTGTCAGCCTT
CGCGATGGTTTCGTGTGCGCCTTGCTGCGTTTCCGACAGCACGTGCTGGGCACCTCGCCGGATCGAGTAG
TACAGCACTTGTGCAAACGGAGGGTGGAGCCCCCTGAGCTGCCAGAAGACTTGAAACATTGGATCTCCTA
CAATGAGACCAGCAGCCAGCTGCTCCGTGCTGAGAGCGGCCTCAGTGACAGAAAGGACCAGTGA

Translation (207 aa):
MLELLVASLSLALAFFALLDGWYLVRVPCAVLRARLLQPRVRDLLAEQRYAGRVLPSDLDLLLHMNNARY
LREADVARAAHLTRCGVLGALRDLNAHTVLAASCARYRRSLRLFEPFEVHTRLQGWDDRAFYLEARFVSL
RDGFVCALLRFRQHVLGTSPDRVVQHLCKRRVEPPELPEDLKHWISYNETSSQLLRAESGLSDRKDQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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