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Report for CCDS27343.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27343.1 Public Mus musculus 14 Gpr183 23 108 98 CCDS HistoryNCBI Gene:321019Re-query CCDS DB by CCDS ID:27343.1Re-query CCDS DB by GeneID:321019See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27343.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049872.8 ENSMUSP00000052404.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049872.8Link to Ensembl Protein Viewer:ENSMUSP00000052404.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000049872Re-query CCDS DB by Protein ID:ENSMUSP00000052404
Original member Current member NCBI NM_183031.2 NP_898852.2 Accepted alive Link to Nucleotide Sequence:NM_183031.2Link to Protein Sequence:NP_898852.2Re-query CCDS DB by Nucleotide ID:NM_183031Re-query CCDS DB by Protein ID:NP_898852Link to BLAST:NP_898852.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898852.2 357 Q3U6B2 357 100% 0 0

Chromosomal Locations for CCDS 27343.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 121954034 121955107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGGCTAACAATTTCACTACCCCACTGGCAACGTCTCATGGCAATAACTGTGATCTCTATGCCCACCACA
GC
ACAGCCAGGGTATTAATGCCTCTGCATTACAGCCTGGTCTTCATCATTGGGCTGGTGGGAAACCTGCT
G
GCCTTGGTTGTCATTGTTCAAAACAGAAAAAAAATCAACTCAACCACTCTCTATTCAATGAACTTGGTC
ATT
TCTGACATCCTGTTTACCACAGCTTTACCCACTCGGATAGCCTACTATGCGCTGGGCTTTGATTGGA
GG
ATAGGTGATGCCCTGTGCCGGGTAACTGCTCTGGTGTTCTACATCAACACGTACGCAGGTGTGAACTT
C
ATGACTTGCTTGAGCATAGACCGCTTCTTCGCTGTGGTGCACCCTCTGCGCTACAACAAGATTAAAAGA
ATC
GAATACGCAAAGGGTGTCTGCCTGTCCGTCTGGATTCTGGTCTTTGCTCAAACACTGCCGCTGCTCC
TC
ACCCCTATGTCTAAGGAGGAGGGAGACAAGACCACTTGCATGGAGTATCCAAACTTTGAAGGGACAGC
G
TCCCTGCCGTGGATTCTGCTCGGAGCCTGTCTGCTGGGCTACGTGCTGCCTATCACAGTCATTCTCCTG
TGT
TACTCTCAGATCTGCTGCAAACTCTTCAGGACTGCCAAGCAGAACCCACTCACCGAGAAATCTGGTG
TG
AACAAAAAGGCTCTCAACACAATTATCCTCATCATTGTCGTGTTCATCCTGTGCTTCACGCCCTACCA
C
GTGGCCATCATTCAGCACATGATAAAGATGCTCTGCTCCCCTGGAGCCCTGGAGTGTGGGGCGAGACAT
TCC
TTCCAGATCTCTCTGCACTTCACGGTGTGCCTGATGAACTTCAACTGCTGCATGGACCCGTTCATAT
AC
TTCTTTGCATGCAAAGGGTATAAGAGAAAGGTCATGAAGATGCTCAAACGTCAAGTGAGTGTGTCGAT
C
TCCAGCGCAGTGAGGTCAGCCCCTGAAGAGAATTCGCGGGAAATGACAGAGTCTCAGATGATGATCCAC
TCC
AAGGCCTCCAATGGAAGGTAA


Translation (357 aa):
MANNFTTPLATSHGNNCDLYAHHSTARVLMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTTLYSMNLV
I
SDILFTTALPTRIAYYALGFDWRIGDALCRVTALVFYINTYAGVNFMTCLSIDRFFAVVHPLRYNKIKR
I
EYAKGVCLSVWILVFAQTLPLLLTPMSKEEGDKTTCMEYPNFEGTASLPWILLGACLLGYVLPITVILL
C
YSQICCKLFRTAKQNPLTEKSGVNKKALNTIILIIVVFILCFTPYHVAIIQHMIKMLCSPGALECGARH
S
FQISLHFTVCLMNFNCCMDPFIYFFACKGYKRKVMKMLKRQVSVSISSAVRSAPEENSREMTESQMMIH
S
KASNGR




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser