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Report for CCDS26931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26931.1 Public Mus musculus 14 Antxrl 23 108 98 CCDS HistoryNCBI Gene:239029Re-query CCDS DB by CCDS ID:26931.1Re-query CCDS DB by GeneID:239029See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26931.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058725.4 ENSMUSP00000052816.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058725.4Link to Ensembl Protein Viewer:ENSMUSP00000052816.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000058725Re-query CCDS DB by Protein ID:ENSMUSP00000052816
Original member Current member NCBI NM_172808.2 NP_766396.2 Accepted alive Link to Nucleotide Sequence:NM_172808.2Link to Protein Sequence:NP_766396.2Re-query CCDS DB by Nucleotide ID:NM_172808Re-query CCDS DB by Protein ID:NP_766396Link to BLAST:NP_766396.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766396.2 641 Q8BVM2 641 100% 0 0

Chromosomal Locations for CCDS 26931.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 34053666 34053913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34054897 34054968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34056538 34056609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34058718 34058799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34058953 34058986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34060370 34060449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34060527 34060595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34060910 34060990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34061138 34061198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34065821 34065919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34067353 34067422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34067921 34068011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34069211 34069312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34070457 34070495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34071517 34071738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34073039 34073119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 34075573 34075995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGATGAGCCACAGTCCCTCCATGCCTTGTTCGGCACTTTTTCTGCTCCTGCTCCTGTTGCTTCCTCCCA
CTTTTAAAGGTGGGAGCCTCCGATACCATGGTCCTGGCTGGAAATTATTCCACCGCCTGAGCAAAGGCTT
CAGAAGTTCCCACCAACGCCAGACACAGCAAATGAGGCAAAACGTGCCTCAGGGTCAATCGGGAGATGAT
TGTCAGGGTATTTTCGACCTCTACCTCGTCCTGGACAAATCAGGCAGTGTGGCGGACAACTGGATCCACA
TTTATTCATTTGCAGAGGGTTTGGTGAAGAAATTCACAAACCCTAACCTGCGGATCTCCATCATTACCTA
CTCAACAGAGGCTGAAGTTATCCTGCCACTCACCTCAGACAGTAAAGAAATCAATAAGAGCCTTCTCGTG
CTTAAGAACATAGTGCCTCAAGGACTCACACACATGCAGAAAGGACTAAGAAAGGCAAACGAACAGATCC
GAAAATCTACCTTGGGAGGCCGCATTGTCAACAGCGTGATTATTGCTCTGACTGATGGGCTATTGCTGCT
AAAGCCATATCTTGACACTATGGAAGAGGCCAAAAAAGCCCGGAGAATGGGAGCAATCGTTTACACCGTG
GGTGTTTTTATGTATAGCAAACAGCAGTTGGTGAATATTGCGGGCGACCCAGATCGCTGTTTTGGGGTTG
ATGAAGGGTTCTCTGCTCTGGAGGGCGTCGTTGACCCACTTACTTCCAAGTCCTGTACTGAAATACTATC
CGTGCAGCCTACCTACGTTTGTGCAAAAGACTTCTATCAAGTAAACATTAGTGGACATGGGCTTAATAAT
ACAAGCAATATGAAGCAAGTCATTTGTAGATTCAAATTCAGTGACTCCAAAGTCGTTGATGAAAGTCCCA
GTGATATGAATGAGCACAGTATAACCTGTCCTGGACCAAAGATAAAACACACTGGAGAGGACGTTTCTCT
TCAAGTCAGTCTGAACAATGGCATCTCCTTCATTGGGAACAAACTCATTATAACCAGTACCAACTGCTGG
AGTCCTAGGGCATCACAAGGCATCGTGTTCAAGAGGACCTGGCTGATGTTCCTGCCAGTCTTGCTGGTGA
CTCTACTCTTGCTGTGCTGCACCTGGAAGCTTTGCATAAAGCCTAAGAAACTGCCGCCACCTCCCCCAAA
GCCAGAGAAGGAGCCAGAGGAAGAGAGCCCTCCTCCTTCATCACCACCAGCTCCTGGTCGTGGTCCTGGT
CCTGGTCCTAGTGCTGGTCCTGGTCCTGGTCCTGGTCCTAGTCCTGGTTCTGGTCCTGCTCGTTCTCCTG
TTCCTGCTCGTCCTCCTCCAGCCCCATTGCCTGCCAACACAAACCCTACTGTGATCGTTGCCTGCTGTGG
CTGTGGCAACAGAGGCATGCAGGGAAACCTGGACACATGCTGTGACTACTTTCACCCAAGCTGCCACCCG
ATGCCATTGGTTTGGTGTCATCCCAAGGCGCAGGGAGGCTATCCCGGCTTCGCTGTCATGAAACCCAGCT
GCTCACAGGCCTCCTGCCGCCAAAAGCACTGCCTTTGTTCCAATCGGGATTGTTTTCACCTTGCAGAACC
ACCATACCCCACAAGGATTGTCTTTCAACCCAATGAGAAGTATTTCAGCATCACACAGTCACACTACAGC
CCAAAGATCCGCTTTCAAACCAACCAAGAAAGTCTCCCAGTTGCACAGACTCTGTGCTCAAAGATGTGTT
CACCACCCAATCAGGAGTGCTACACTTTCAAATCCCCACAGTCCCCATACCAAGCCAGGTATACCAAGTC
TCCCGCCAGGATGCTGCCTCTGCTCCCGCCCCATACCCGGCAATCTTTAGAATCCCTTTGTCACACCTAT
CCTTTCCCCCCAATCTCTAAAGGACCAAAGTTCTAA

Translation (641 aa):
MMSHSPSMPCSALFLLLLLLLPPTFKGGSLRYHGPGWKLFHRLSKGFRSSHQRQTQQMRQNVPQGQSGDD
CQGIFDLYLVLDKSGSVADNWIHIYSFAEGLVKKFTNPNLRISIITYSTEAEVILPLTSDSKEINKSLLV
LKNIVPQGLTHMQKGLRKANEQIRKSTLGGRIVNSVIIALTDGLLLLKPYLDTMEEAKKARRMGAIVYTV
GVFMYSKQQLVNIAGDPDRCFGVDEGFSALEGVVDPLTSKSCTEILSVQPTYVCAKDFYQVNISGHGLNN
TSNMKQVICRFKFSDSKVVDESPSDMNEHSITCPGPKIKHTGEDVSLQVSLNNGISFIGNKLIITSTNCW
SPRASQGIVFKRTWLMFLPVLLVTLLLLCCTWKLCIKPKKLPPPPPKPEKEPEEESPPPSSPPAPGRGPG
PGPSAGPGPGPGPSPGSGPARSPVPARPPPAPLPANTNPTVIVACCGCGNRGMQGNLDTCCDYFHPSCHP
MPLVWCHPKAQGGYPGFAVMKPSCSQASCRQKHCLCSNRDCFHLAEPPYPTRIVFQPNEKYFSITQSHYS
PKIRFQTNQESLPVAQTLCSKMCSPPNQECYTFKSPQSPYQARYTKSPARMLPLLPPHTRQSLESLCHTY
PFPPISKGPKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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