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Report for CCDS26738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26738.1 Public Mus musculus 13 Cenph 23 108 98 CCDS HistoryNCBI Gene:26886Re-query CCDS DB by CCDS ID:26738.1Re-query CCDS DB by GeneID:26886See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26738.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075550.3 ENSMUSP00000074988.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075550.3Link to Ensembl Protein Viewer:ENSMUSP00000074988.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000075550Re-query CCDS DB by Protein ID:ENSMUSP00000074988
Original member NCBI NM_021886.2 NP_068686.1 Updated not alive Link to Nucleotide Sequence:NM_021886.2Link to Protein Sequence:NP_068686.1Re-query CCDS DB by Nucleotide ID:NM_021886Re-query CCDS DB by Protein ID:NP_068686
Current member NCBI NM_021886.3 NP_068686.1 Accepted alive Link to Nucleotide Sequence:NM_021886.3Link to Protein Sequence:NP_068686.1Re-query CCDS DB by Nucleotide ID:NM_021886Re-query CCDS DB by Protein ID:NP_068686Link to BLAST:NP_068686.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068686.1 241 Q9QYM8 241 100% 0 0

Chromosomal Locations for CCDS 26738.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 100760102 100760194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100761761 100761924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100763550 100763601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100764169 100764232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100766825 100766881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100771195 100771269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100771655 100771703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100772726 100772781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100775687 100775802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGAGGAGCAGCCGCGGGAGAGGTCTGAGGCCGGGGCTGAGGCCTGCGAAGAGAAGCGGGGTCTGTCGC
AGGCCGCGGAGGAGCGTATCGAGGACCGTATCAGCCTGCTGCTCAGGCTGAGAGCTCAGACAAAACAGCA
GCTCTTAGAATATAAGTCCATGATCGACACAAATGAAGAAAAAACTCCAGAACAGATTATGCAAGAAAAA
CAGATCGAAGTTAAAATTGAAGAGCTGGAGAATGAAATTGAAGATGTAAAAAGTAATATTGAAATGAAAA
GTCTTGCACTGAGCAGGATGAAACTTTCAGTTGCACTTCGGGATAACATGGAGAACATGGGACCTGAGAA
TTGTGTGCTCACAGATGACATGAAGCACATATTAAAGCTACAAAAGTTAATAATGAAGTCCCAGGAGGAG
TCTTCAGAACTGGAGAAAAAGCTGCTTGATGTCAGAAAGAAGAGACTACAACTAAAGCAAGCTTCAAGAA
GTAAGCTTTTAGAAATACAAATCGAGAAGAACAAACAGAAAGAGGATGTTGACAAGATGGAGAATTCTGA
AATGATAAAGACCATGAAAAAAAAACTACAGACGGAGATAAAGATCACTACAGTTGTTCAACATACATTC
CAGGGCCTTATTTTGGCGAGTAAAACCAACTGGGCAGAGGACCCTGCCCTCAGAGAGACAGTGCTGCAGC
TGGAGAAGGACCTCAACACGCTATGA

Translation (241 aa):
MEEQPRERSEAGAEACEEKRGLSQAAEERIEDRISLLLRLRAQTKQQLLEYKSMIDTNEEKTPEQIMQEK
QIEVKIEELENEIEDVKSNIEMKSLALSRMKLSVALRDNMENMGPENCVLTDDMKHILKLQKLIMKSQEE
SSELEKKLLDVRKKRLQLKQASRSKLLEIQIEKNKQKEDVDKMENSEMIKTMKKKLQTEIKITTVVQHTF
QGLILASKTNWAEDPALRETVLQLEKDLNTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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