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Report for CCDS26590.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26590.1 Public Mus musculus 13 Fbp1 23 108 98 CCDS HistoryNCBI Gene:14121Re-query CCDS DB by CCDS ID:26590.1Re-query CCDS DB by GeneID:14121See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26590.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092888.10 ENSMUSP00000090564.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092888.10Link to Ensembl Protein Viewer:ENSMUSP00000090564.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000092888Re-query CCDS DB by Protein ID:ENSMUSP00000090564
Original member NCBI NM_019395.3 NP_062268.1 Updated not alive Link to Nucleotide Sequence:NM_019395.3Link to Protein Sequence:NP_062268.1Re-query CCDS DB by Nucleotide ID:NM_019395Re-query CCDS DB by Protein ID:NP_062268
Current member NCBI NM_019395.4 NP_062268.1 Accepted alive Link to Nucleotide Sequence:NM_019395.4Link to Protein Sequence:NP_062268.1Re-query CCDS DB by Nucleotide ID:NM_019395Re-query CCDS DB by Protein ID:NP_062268Link to BLAST:NP_062268.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062268.1 338 Q9QXD6 338 100% 0 0

Chromosomal Locations for CCDS 26590.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 62864976 62865167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62867339 62867458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62868982 62869119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62871166 62871306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62872690 62872782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62875149 62875311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 62887874 62888043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGCGAACCATGCGCCCTTCGAAACGGATATCAGCACCCTGACCCGCTTCGTCATGGAGCAGGGCAGGA
AGGCTCAGGGCACGGGGGAGTTGACCCAGCTGCTGAATTCGCTCTGCACCGCGATCAAAGCCATCTCGTC
TGCGGTGCGCCAGGCGGGCATCGCACAGCTCTATGGTATCGCTGGCTCAACCAATGTGACTGGGGATCAA
GTAAAGAAGCTGGACATACTTTCCAATGACCTGGTGATCAATATGCTGAAGTCGTCCTACGCTACCTGTG
TTCTTGTGTCTGAAGAAAACACAAATGCCATCATAATCGAACCTGAGAAGAGGGGCAAATATGTTGTCTG
TTTCGATCCCCTTGATGGCTCATCCAACATTGACTGCCTTGTGTCCATCGGAACCATTTTTGGCATTTAC
AGAAAGAAAAGTACTGATGAGCCTTCTGAGAAGGATGCTCTGCAGCCCGGCCGGGACCTGGTGGCAGCCG
GGTATGCGCTCTATGGCAGTGCCACCATGTTGGTCCTTGCCATGGATTGTGGTGTCAACTGCTTCATGCT
GGACCCGTCCATTGGAGAATTCATTATGGTGGACAGGGACGTGAAGATGAAGAAGAAAGGTAACATCTAC
AGCCTTAATGAGGGTTATGCCAAGGACTTTGACCCTGCCATCAATGAGTATCTCCAGAGGAAAAAGTTCC
CTCCGGATGGTTCAGCCCCCTATGGTGCCCGGTATGTGGGGTCCATGGTGGCTGATATTCACCGCACTCT
GGTATATGGAGGGATCTTTTTATACCCCGCCAACAAGAAAAGCCCAAGTGGAAAGCTGCGGCTGCTGTAT
GAGTGCAACCCCATAGCTTATGTCATGGAGAAGGCCGGTGGGCTCGCCACCACGGGGGACAAAGATATAT
TAGACATCGTTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGGTCCTCTGAAGATGTGCAGGA
GTTCCTGGAGATCTACAGGAAGCACAAAGCCAAGTGA

Translation (338 aa):
MANHAPFETDISTLTRFVMEQGRKAQGTGELTQLLNSLCTAIKAISSAVRQAGIAQLYGIAGSTNVTGDQ
VKKLDILSNDLVINMLKSSYATCVLVSEENTNAIIIEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIY
RKKSTDEPSEKDALQPGRDLVAAGYALYGSATMLVLAMDCGVNCFMLDPSIGEFIMVDRDVKMKKKGNIY
SLNEGYAKDFDPAINEYLQRKKFPPDGSAPYGARYVGSMVADIHRTLVYGGIFLYPANKKSPSGKLRLLY
ECNPIAYVMEKAGGLATTGDKDILDIVPTEIHQKAPVVMGSSEDVQEFLEIYRKHKAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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