NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26482.1 Public Mus musculus 13 Gmpr 23 108 98 CCDS HistoryNCBI Gene:66355Re-query CCDS DB by CCDS ID:26482.1Re-query CCDS DB by GeneID:66355See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26482.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000000260.12 ENSMUSP00000000260.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000000260.12Link to Ensembl Protein Viewer:ENSMUSP00000000260.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000000260Re-query CCDS DB by Protein ID:ENSMUSP00000000260
Original member Current member NCBI NM_025508.5 NP_079784.1 Accepted alive Link to Nucleotide Sequence:NM_025508.5Link to Protein Sequence:NP_079784.1Re-query CCDS DB by Nucleotide ID:NM_025508Re-query CCDS DB by Protein ID:NP_079784Link to BLAST:NP_079784.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079784.1 345 Q9DCZ1 345 100% 0 0

Chromosomal Locations for CCDS 26482.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 45507657 45507743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45514395 45514514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45516999 45517082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45520852 45521025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45529708 45529789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45532294 45532400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45539025 45539067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45542479 45542638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 45545873 45546053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGCCCCGCATAGACGCGGACCTTAAACTCGACTTCAAGGATGTTCTGCTGCGACCTAAGCGGAGCAGCC
TCAAGAGCCGATCCGAGGTGGATCTTGAGCGAACTTTTACATTTCGAAACTCGAAGCAAACCTACTCAGG
GATTCCCATCATTGTGGCCAACATGGACACTGTGGGGACATTTGAGATGGCTGTGGTGATGTCACAGCAT
GCCATGTTTACAGCCGTTCACAAGCACTACTCCCTGGATGACTGGAAATGTTTTGCGGAAACCCACCCCG
AATGCCTGCAGCATGTAGCCGTGAGTTCTGGCAGCGGGCAGAATGATCTTGAGAGGATGAGCCGCATCTT
GGAAGCTGTGCCTCAGGTGAAGTTCATCTGCCTGGATGTGGCCAATGGGTATTCAGAGCATTTTGTGGAA
TTCGTGAAACTGGTCCGATCCAAATTCCCCGAACACACCATCATGGCAGGGAACGTGGTGACCGGAGAGA
TGGTGGAAGAGCTCATCCTCTCTGGAGCAGATATCATCAAAGTGGGAGTCGGACCAGGTTCTGTGTGCAC
CACCCGAACCAAGACAGGAGTGGGCTACCCGCAGCTGAGTGCGGTGATAGAGTGTGCTGACTCCGCCCAT
GGCCTCAAGGGGCACATCATCTCTGATGGAGGCTGCACATGTCCAGGAGATGTCGCCAAAGCCTTTGGAG
CTGGTGCAGACTTTGTCATGCTGGGAGGCATGTTTTCAGGCCACACCGAGTGTGCAGGTGAGGTGATCGA
GAGGAACGGGCAGAAGCTGAAACTCTTCTATGGCATGAGCTCAGACACAGCCATGAAGAAACACGCAGGA
GGCGTCGCCGAGTACAGGGCCTCCGAGGGCAAGACCGTGGAAGTGCCTTACAAAGGGGACGTGGAGAACA
CCATTCTGGATATCCTTGGAGGACTGCGCTCCACCTGTACCTACGTCGGGGCTGCCAAGCTCAAAGAGCT
CAGCAGGAGAGCCACGTTCATCCGGGTGACCCAACAGCACAACACGGTGTTTGGTTAA

Translation (345 aa):
MPRIDADLKLDFKDVLLRPKRSSLKSRSEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVMSQH
AMFTAVHKHYSLDDWKCFAETHPECLQHVAVSSGSGQNDLERMSRILEAVPQVKFICLDVANGYSEHFVE
FVKLVRSKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAH
GLKGHIISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGQKLKLFYGMSSDTAMKKHAG
GVAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH