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Report for CCDS26436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26436.1 Public Mus musculus 13 Serpinb9f 23 108 98 CCDS HistoryNCBI Gene:20709Re-query CCDS DB by CCDS ID:26436.1Re-query CCDS DB by GeneID:20709See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26436.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075515.6 ENSMUSP00000074958.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075515.6Link to Ensembl Protein Viewer:ENSMUSP00000074958.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000075515Re-query CCDS DB by Protein ID:ENSMUSP00000074958
Original member Current member NCBI NM_183197.1 NP_899020.1 Accepted alive Link to Nucleotide Sequence:NM_183197.1Link to Protein Sequence:NP_899020.1Re-query CCDS DB by Nucleotide ID:NM_183197Re-query CCDS DB by Protein ID:NP_899020Link to BLAST:NP_899020.1

Chromosomal Locations for CCDS 26436.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33325827 33325994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33327246 33327386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33327825 33327942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33329369 33329511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33332122 33332277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33334245 33334652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGAATACTCTGTCTCAAGCCAATGGCACCTTTGCCATCCATCTTTTGAAGGTGCTCTGTCAAGACAACC
CTTCAAAAAATGTGTGTTATTCTCCTATGAGCATCTCTTCTGCTCTAGCCATGGTTCTCTTGGGTGCAAA
GGGAGACACTGCAGTCCAGATATGTCAGGCACTTCATTTAAACCCAGATGAAGATGTCCATCAGGGCTTC
CAGTTGCTTCTCCATAACTTGAACAAGCAAAACAACCAAAAGTACTGCCTTAGAATGGCCAACAGGCTCT
TTGTAGAAAATACTTGTGAATTACTTCCAACATTTAAGGAGTCCTGTCTTAAATTCTACCACTCTGAGAT
GGAGCAGCTCTCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAG
ACTAATGGTAAAATTCCAGACTTATTGTCAAAAGACTCAGTTAATTCACAGACCAGGCTGATTCTCGCCA
ATGCCTTATATTTCCATGGAACATGGTGTAAACGTTTTGAAAAAAATAGGACCAAGGAAATGCCCTTTAA
GATAAACAAGAAGGAAACAAGACCAGTGCAGATGATGTGGCGGGAAGACACATTATTCCATGCCTATGTG
AAGGAAATCCAGGCACAAGTGCTAGTGATGCCCTATGAGGGCATAGATTTGAATTTTGTGGTCCTACTCC
CAGATGAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAA
ACCAGAGTTTATGAATCGCACTGAGTTTCATGTTTATCTTCCAAAATTTCAACTACAAGAGGATTATGAT
ATGAATTCCCTGCTACAGCATTTGGGAATTTTGAATGTCTTCGATGGAAGCAAGGCTGACTTATCAGGAA
TGTCTACTAAGGAAAACCTGTGTCTGTCCGAGTTTGTTCACAAGTGTGTAGTAGAGGTCAATGAGGAAGG
AACAGAGGCTGCTGCAGCCTCTGCTGTAGAATTTATATTTTTATGTTTAGGTCCTGATCCTGAAACTTTC
TGTGCTGACCACCCCTTCCTTTTCTTCATCATGCACAGCACAACTAACAGCATCCTGTTCTGTGGCAGAT
TCTCATCTCCATAA

Translation (377 aa):
MNTLSQANGTFAIHLLKVLCQDNPSKNVCYSPMSISSALAMVLLGAKGDTAVQICQALHLNPDEDVHQGF
QLLLHNLNKQNNQKYCLRMANRLFVENTCELLPTFKESCLKFYHSEMEQLSFAKAAEESRQHINMWVSKQ
TNGKIPDLLSKDSVNSQTRLILANALYFHGTWCKRFEKNRTKEMPFKINKKETRPVQMMWREDTLFHAYV
KEIQAQVLVMPYEGIDLNFVVLLPDEGVDISKVENNLTFEKLTAWTKPEFMNRTEFHVYLPKFQLQEDYD
MNSLLQHLGILNVFDGSKADLSGMSTKENLCLSEFVHKCVVEVNEEGTEAAAASAVEFIFLCLGPDPETF
CADHPFLFFIMHSTTNSILFCGRFSSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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