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Report for CCDS26144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26144.1 Public Mus musculus 12 Serpina9 23 108 98 CCDS HistoryNCBI Gene:71907Re-query CCDS DB by CCDS ID:26144.1Re-query CCDS DB by GeneID:71907See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26144.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058464.4 ENSMUSP00000058535.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058464.4Link to Ensembl Protein Viewer:ENSMUSP00000058535.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000058464Re-query CCDS DB by Protein ID:ENSMUSP00000058535
Original member NCBI NM_001361910.1 NP_001348839.1 Updated not alive Link to Nucleotide Sequence:NM_001361910.1Link to Protein Sequence:NP_001348839.1Re-query CCDS DB by Nucleotide ID:NM_001361910Re-query CCDS DB by Protein ID:NP_001348839
Current member NCBI NM_001361910.2 NP_001348839.1 Accepted alive Link to Nucleotide Sequence:NM_001361910.2Link to Protein Sequence:NP_001348839.1Re-query CCDS DB by Nucleotide ID:NM_001361910Re-query CCDS DB by Protein ID:NP_001348839Link to BLAST:NP_001348839.1
Original member NCBI NM_001361912.1 NP_001348841.1 Updated not alive Link to Nucleotide Sequence:NM_001361912.1Link to Protein Sequence:NP_001348841.1Re-query CCDS DB by Nucleotide ID:NM_001361912Re-query CCDS DB by Protein ID:NP_001348841
Current member NCBI NM_001361912.2 NP_001348841.1 Accepted alive Link to Nucleotide Sequence:NM_001361912.2Link to Protein Sequence:NP_001348841.1Re-query CCDS DB by Nucleotide ID:NM_001361912Re-query CCDS DB by Protein ID:NP_001348841Link to BLAST:NP_001348841.1
Original member NCBI NM_027997.3 NP_082273.1 Updated not alive Link to Nucleotide Sequence:NM_027997.3Link to Protein Sequence:NP_082273.1Re-query CCDS DB by Nucleotide ID:NM_027997Re-query CCDS DB by Protein ID:NP_082273
Current member NCBI NM_027997.4 NP_082273.1 Accepted alive Link to Nucleotide Sequence:NM_027997.4Link to Protein Sequence:NP_082273.1Re-query CCDS DB by Nucleotide ID:NM_027997Re-query CCDS DB by Protein ID:NP_082273Link to BLAST:NP_082273.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001348839.1 418 Q9D7D2 418 100% 0 0
NP_001348841.1 418 Q9D7D2 418 100% 0 0
NP_082273.1 418 Q9D7D2 418 100% 0 0

Chromosomal Locations for CCDS 26144.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 103996991 103997191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103998121 103998268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104001227 104001500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104008259 104008892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGGGCTCTTCTTCCTTTTACCGAGTTCTCCTATTGGTTGGCTTCTGTGCTCCAATATTCTGCATGTTGT
CATCCAATCCCTACAACCAAGAGTCCTCCCACCTTCCCTCTATGAAGAAAAACCCGGCCTCCCAGGTGTC
TCCCAGCAACACCAGATTCTCCTTCCTCCTGTACCAGAGGCTGGCTCAGGAAAACCCAGGTCAGAATATC
CTCTTTTCTCCTGTGAGTATCTCTACCTCCCTGGCCATGCTGTCCCTAGGGGCCCGCTCAGCCACCAAGA
CACAGATCCTCCGGACTCTTGGCTTCAACTTCACGTGGGTTTCGGAGCCCACCATCCACATGGGCTTCGA
GTACCTCGTCCGCTCACTAAACAAGTGCCACCAAGGCCGGGAATTGCGGATGGGCAGCGTCCTCTTCATC
AGGAAGGAGCTACAGCTGCAGGCCACGTTTCTGGACAGGGTCAAGAAGCTTTACGGGGCAAAAGTCTTTT
CTGAAGACTTCTCAAATGCTGCCACCGCCCAGGCCCAGATCAACAGTTATGTGGAAAAGGAGACCAAAGG
GAAGGTGGTGGATGTAATCCAAGACCTTGACTCTCAGACAGCCATGGTCCTGGTGAACCACATCTTCTTT
AAAGCCAACTGGACCCAGCCTTTTAGTACTGCAAACACAAACAAGAGCTTCCCATTCCTCCTGAGCAAGG
GCACCACTGTACATGTTCCCATGATGCACCAGACCGAGTCGTTTGCTTTTGGAGTGGACAAGGAGCTAGG
CTGCTCTATTCTGCAGATGGACTACAGGGGAGATGCTGTGGCCTTCTTTGTCCTCCCTGGCAAGGGCAAG
ATGAGGCAGCTGGAGAAAAGTCTGTCTGCCAGGAGGCTAAGGAAGTGGAGCCGCTCACTCCAGAAAAGAT
GGATCAAGGTGTTCATTCCAAAATTTTCCATCTCTGCTTCCTACAACCTGGAAACCATCCTCCCCAAGAT
GGGAATCCGCGATGCCTTTAACTCAAACGCTGACTTCTCCGGAATTACAAAGACACACTTCCTGCAGGTT
TCTAAGGCTGCTCACAAGGCTGTGCTGGACGTCAGCGAGGAGGGGACAGAAGCCGCGGCAGCCACCACCA
CCAAACTTATAGTCCGCTCAAGGGACACCCCGTCTTCTATCATTGCCTTCAAGGAACCCTTCCTGATTCT
ACTTCTAGATAAAAACACAGAATCTGTTCTCTTTCTAGGGAAAGTTGAAAACCCCAGGAAGATGTAG

Translation (418 aa):
MGSSSFYRVLLLVGFCAPIFCMLSSNPYNQESSHLPSMKKNPASQVSPSNTRFSFLLYQRLAQENPGQNI
LFSPVSISTSLAMLSLGARSATKTQILRTLGFNFTWVSEPTIHMGFEYLVRSLNKCHQGRELRMGSVLFI
RKELQLQATFLDRVKKLYGAKVFSEDFSNAATAQAQINSYVEKETKGKVVDVIQDLDSQTAMVLVNHIFF
KANWTQPFSTANTNKSFPFLLSKGTTVHVPMMHQTESFAFGVDKELGCSILQMDYRGDAVAFFVLPGKGK
MRQLEKSLSARRLRKWSRSLQKRWIKVFIPKFSISASYNLETILPKMGIRDAFNSNADFSGITKTHFLQV
SKAAHKAVLDVSEEGTEAAAATTTKLIVRSRDTPSSIIAFKEPFLILLLDKNTESVLFLGKVENPRKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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