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Report for CCDS26019.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26019.1 Public Mus musculus 12 Adam4 23 108 98 CCDS HistoryNCBI Gene:11498Re-query CCDS DB by CCDS ID:26019.1Re-query CCDS DB by GeneID:11498See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26019.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085319.3 ENSMUSP00000082427.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085319.3Link to Ensembl Protein Viewer:ENSMUSP00000082427.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000085319Re-query CCDS DB by Protein ID:ENSMUSP00000082427
Original member Current member NCBI NM_009620.2 NP_033750.1 Accepted alive Link to Nucleotide Sequence:NM_009620.2Link to Protein Sequence:NP_033750.1Re-query CCDS DB by Nucleotide ID:NM_009620Re-query CCDS DB by Protein ID:NP_033750Link to BLAST:NP_033750.1

Chromosomal Locations for CCDS 26019.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 81419554 81421845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2292 nt):
ATGGCTCCCTTCCTCAGACCATCTACCTGGACTTTGGCCCTCCTGAGAGGTGCTCTCTGGCTCTCTGTGC
TCTGGGCACTGTTGTCTCCTGCCTGCTGTTCCCGTAGCCCACCCAAATGGCGCTTCTCTACCTCTGAAAT
TGTCATCCCCAGGAAGGTTCCCCAGAGAATGGGCAAAAGTGATATGTCTGGGCACATCACCTATAGCATG
CGCTTTAGGGGACAAAGACATGTGGTCCACATGAAACTCAAGAAAAACATGATTCCTCAAAATTTTCCTG
TATATACCTCTAATGACCAAGGAGCCCAACAGAAGGATTACCCATTTGTTCCTCGGGATTGTTACTTCTA
CAGCTTCCTGGAAGGAGTCCCTGGGTCCCAAGCTATACTAGATACCTGTACTGGAGGTCTGAAAGGCATG
ATACAGGTGGATGACTTCACTTATGAAATCAAACCATTGGCATCTTCTTCCAAATTTGAGCATGTAATTT
CTCTGCTTGTGGTGGATGAAAGGTCACGTGAGTCAAAAAAGTGTAGAAATGATGAGATTATGGCAAAGGC
AGGTGACCTCTCTGAAGAGACCAAGCTGGCTGGAAGTCCCAGAGCAGCCCCTGTATATCTGTGGCGTTAC
CATTTGAAAAGTGTAGGAATACACTACACGGTGACTCATGACTTATTCAAACAAACTGGGAGCAATTCCT
CCACCTCAGTTGAGTTAATACTGATTATGAATAGCATTTCAGATAGCATTTATAAAATAAGTGGATTGAT
TGTGTATGCACGTGGTGTATGGATTTGGAATACGAAGAACCTGCATACTGTCCCCGGTGAAAATCCCCAC
CTTGATCCTTGGAGTGTTATGGCAGGTTTTGGTGTATGGAAATCTAAAGAATTGCACGATTTGTATGCCA
CTACAGCTATTCTCCTTGCATCAAGACCAAAAAATACAGATTATGGAAGCTTTCAGAATGGATTATGTAA
CCCCAACTGGGGAGTATTATTTACATATGTAGGAAAAAACCATTTATTTCTGGCTGGATCTTTCCTGGCA
CATGCAGTGGGTCACCTTTTAGATGTAAGCCATGATACACCAGGCTGTGTTTGTTTCAGAAGGAGCAGTT
GTCTCATGGATGAATTTCCTACTCTTCATGATATGATTAGTAATTGTTCCCATAATGAGTTACATAGGAG
GATCCATGACTGGGACCCTTGCTTGAGTTTAGAGCTAAAAACAGCTAAAGAAGTAAACATGTATGAAGTT
CCTCGTTGTGGAAATAAGAGAGTGGAGGCCAGTGAGAAATGTGACTGTGGTTCTGTGAAAGACTGTACCA
CTGATAAGTGTTGTGAAGTCAATTGTGAGTTTACTCAGGGTAGCTCTTGTGCTGCAGGAGGTTGCTGTCT
ATCTTGTAAGTTTGCACCCACTGGAACAATATGCAGAGACAAAAATGGTATTTGTGATCTTCCAGAGTAC
TGTAGTGGAGCCTCAGAGCATTGCCCAGGAAATTTTTACATCATGGATGGAACTCCTTGTTCTCCACTGG
CAGTCTGCATAGCAGGAAACTGTAGTGACCGTCATTTGCAGTGTCAAGCTCTTTTTGGATACCAAGTAAA
GGATGGTTCACCAGCATGCTATAATGAATTAAATGTCAAAGGTGACCGATTTGGAAACTGTGGCATTAGA
ATCATACGTGGAGGAAGCCAACCTGTCCCATGTCAAAAGGAGGATGTTTTTTGTGGAATGATCCACTGTG
ATGGTGTCAGTCATATTCCTGGTGGAGGTGAGCACACTACCTTTTATCACCTAAAGGTTCAAGATGTTAA
AGAAGAACAGTGCTTTGGGTATGATGCACACCATGGGACAGAACTTCCAGAAATGGGGCTTGTAGTGGAT
GGTGCAACCTGTGGCCCTGGCAAATATTGTAAAGCTCAAAGATGTGTTGCTCATCCAACTTTGAATTTTA
ATTGCAACATTAGTTCGTGTAACTTCAGAGGGGTGTGCAACAACAAAGGCAACTGTCACTGTGTTCGAGG
ATGGCAGCCACCACATTGTTTACAAATAGGAAAAGGTGGTAGTACAAATAGTGGCCCTCCACCTACCACT
CAGAAAAAACATCAAGCTGAAATACATGTGAGTGCCAACAGGCTAATAGTCATTTTAAGTATTCGCATGA
TTCTTATCTTGGCTTCGATTCTTTTGGGTGCAGTTTTCAAAGCAATATTTGTTTCAGAAACTACAGAAGA
GGAGCAACATTCTGCTGTTAACAGACAGTTGACTTCATACCAAACTATTTGA

Translation (763 aa):
MAPFLRPSTWTLALLRGALWLSVLWALLSPACCSRSPPKWRFSTSEIVIPRKVPQRMGKSDMSGHITYSM
RFRGQRHVVHMKLKKNMIPQNFPVYTSNDQGAQQKDYPFVPRDCYFYSFLEGVPGSQAILDTCTGGLKGM
IQVDDFTYEIKPLASSSKFEHVISLLVVDERSRESKKCRNDEIMAKAGDLSEETKLAGSPRAAPVYLWRY
HLKSVGIHYTVTHDLFKQTGSNSSTSVELILIMNSISDSIYKISGLIVYARGVWIWNTKNLHTVPGENPH
LDPWSVMAGFGVWKSKELHDLYATTAILLASRPKNTDYGSFQNGLCNPNWGVLFTYVGKNHLFLAGSFLA
HAVGHLLDVSHDTPGCVCFRRSSCLMDEFPTLHDMISNCSHNELHRRIHDWDPCLSLELKTAKEVNMYEV
PRCGNKRVEASEKCDCGSVKDCTTDKCCEVNCEFTQGSSCAAGGCCLSCKFAPTGTICRDKNGICDLPEY
CSGASEHCPGNFYIMDGTPCSPLAVCIAGNCSDRHLQCQALFGYQVKDGSPACYNELNVKGDRFGNCGIR
IIRGGSQPVPCQKEDVFCGMIHCDGVSHIPGGGEHTTFYHLKVQDVKEEQCFGYDAHHGTELPEMGLVVD
GATCGPGKYCKAQRCVAHPTLNFNCNISSCNFRGVCNNKGNCHCVRGWQPPHCLQIGKGGSTNSGPPPTT
QKKHQAEIHVSANRLIVILSIRMILILASILLGAVFKAIFVSETTEEEQHSAVNRQLTSYQTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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