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Report for CCDS25731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25731.1 Public Mus musculus 11 Fscn2 23 108 98 CCDS HistoryNCBI Gene:238021Re-query CCDS DB by CCDS ID:25731.1Re-query CCDS DB by GeneID:238021See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25731.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026445.2 ENSMUSP00000026445.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026445.2Link to Ensembl Protein Viewer:ENSMUSP00000026445.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000026445Re-query CCDS DB by Protein ID:ENSMUSP00000026445
Original member Current member NCBI NM_172802.4 NP_766390.2 Accepted alive Link to Nucleotide Sequence:NM_172802.4Link to Protein Sequence:NP_766390.2Re-query CCDS DB by Nucleotide ID:NM_172802Re-query CCDS DB by Protein ID:NP_766390Link to BLAST:NP_766390.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766390.2 492 Q32M02 492 100% 0 0

Chromosomal Locations for CCDS 25731.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 120361709 120362534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120366641 120366797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120367237 120367358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120367657 120367824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120367904 120368109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGCCAACCAACGGTCTGCACCAGGTGCTGAAGATCCAGTTTGGCCTTGTTAACGATGCCGACCGCTACC
TGACTGCAGAGAGCTTTGGCTTCAAGGTCAACGCCTCCGCAGCCAGCCTCAAGAGGAAGCAGATCTGGGT
CCTGGAGCCTGACCCGGGGCAGGGCACTGCCGTGCTGTTCCGAAGCAGTCACCTAGGCCGCTACCTGTCA
GCAGAAGAAGATGGACGTGTGGCCTGTGAGATGGATCAGCCGGGCCGTGACTGCCGCTTCCTGGTCTTGC
CGCAGCCTGATGGGCGCTGGGTGCTGCAGTCAGAGCCACACGGCCGCTTCTTCGGTGGCATTGAGGACCG
ACTGTCCTGCTTTGCCACGGCCATTTCCCCGGCAGAGCTGTGGACTGTGCACCTGGCCATCCACCCACAG
GCTCATTTGCTGAGTGTGAGCCGTCGGCGCTACGTGCACCTGTGCCTTCAGGAAGATGAGATGGCAGCAG
ACGGTGACATGCCATGGGGTGTGGACGCACTAGTCACCCTCATTTTCCAGAGCAGGCGGTACTGCCTCAA
GTCTTATGACAGCCGCTACCTTCGCAGCGATGGCCGCCTTGTCTGGGAACCTGAAGCCCATGCCTGCTAC
ACGCTGGAGTTCAAGGCAGGCAAGCTGGCCTTCAAGGACTGTGACGGCCGGTACCTGGCACCTGTGGGGC
CTGCTGGCACACTCAAGGCTGGTCGCAACACGAGGCCCAGCAAGGATGAACTCTTCGACCTGGAGCAAAG
TCACCCACAGGTGGTGCTGGTAGCTGCCAACCGGCGCTACATCTCTGTGAGGCAAGGAATCAATGTCTCA
GCCAATCAGGATGAAGAACTGGGTCATGAGACATTCCTGATGCAAATCGACCAGGAGACAAAGAAGTGTA
CTTTCTATTCCAGCACTGGGGGCTACTGGACCTTGGTCACCCATGGGGGCATTCAGGCCACAGCCACACA
AGTCTCTGCCAACACCATGTTTGAAATAGAATGGCATGGCCGGCGGGTGGCACTTAAAGCCAGCAACGGG
CGTTTTGTGTGCATGAAGAAAAACGGGCAGCTGGCCGCCATCAGCGACTTTGTGGGCGAGGACGAGCTAT
TTACCCTCAAGCTCATCAATCGACCCCTCCTGGTGCTGCGTGGCCTGGATGGCTTTGTGTGCCACCGCCG
GGGCTCCAACCAGCTGGACACCAACCGTTCCACTTACGACGTCTTCCACTTGAGCTTCAGGGATGGCGCC
TATCAGATTAGAGGCCGTGGAGGTGGGTTCTGGTACACAGGCAGCCATGGAAGCGTGTGCAGCGACGGTG
ACTTGGCGGAAGATTTCCTCTTTGAGTTCCGAGAGCGTGGCCGTCTGGCCATCCGAGCCCTCAGCGGCAA
GTACCTGCGTGGAGGAGCCTCAGGGCTCCTGCGTGCTGATGCAGACCTGCCTGTGGGGGAAGCTCTCTGG
GAATACTGA

Translation (492 aa):
MPTNGLHQVLKIQFGLVNDADRYLTAESFGFKVNASAASLKRKQIWVLEPDPGQGTAVLFRSSHLGRYLS
AEEDGRVACEMDQPGRDCRFLVLPQPDGRWVLQSEPHGRFFGGIEDRLSCFATAISPAELWTVHLAIHPQ
AHLLSVSRRRYVHLCLQEDEMAADGDMPWGVDALVTLIFQSRRYCLKSYDSRYLRSDGRLVWEPEAHACY
TLEFKAGKLAFKDCDGRYLAPVGPAGTLKAGRNTRPSKDELFDLEQSHPQVVLVAANRRYISVRQGINVS
ANQDEELGHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIQATATQVSANTMFEIEWHGRRVALKASNG
RFVCMKKNGQLAAISDFVGEDELFTLKLINRPLLVLRGLDGFVCHRRGSNQLDTNRSTYDVFHLSFRDGA
YQIRGRGGGFWYTGSHGSVCSDGDLAEDFLFEFRERGRLAIRALSGKYLRGGASGLLRADADLPVGEALW
EY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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