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Report for CCDS25538.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25538.1 Public Mus musculus 11 Mettl2 23 108 98 CCDS HistoryNCBI Gene:52686Re-query CCDS DB by CCDS ID:25538.1Re-query CCDS DB by GeneID:52686See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25538.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021030.7 ENSMUSP00000021030.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021030.7Link to Ensembl Protein Viewer:ENSMUSP00000021030.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000021030Re-query CCDS DB by Protein ID:ENSMUSP00000021030
Original member Current member NCBI NM_172567.3 NP_766155.3 Accepted alive Link to Nucleotide Sequence:NM_172567.3Link to Protein Sequence:NP_766155.3Re-query CCDS DB by Nucleotide ID:NM_172567Re-query CCDS DB by Protein ID:NP_766155Link to BLAST:NP_766155.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766155.3 389 Q8BMK1-1 389 100% 0 0

Chromosomal Locations for CCDS 25538.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 105126497 105126606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105126776 105126867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105128741 105129075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105130447 105130496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105131573 105131633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105132441 105132580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105135338 105135444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105137719 105137784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105139561 105139769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGGCGGCCTCCTTCCCTGAAGGCGTGCCGGAGACCGAGGACGGGAAGAGACCGCAGTTCGGGCACCGGT
TCCTGAGCGACCCGGCGCGCGTCTTCCATCACAATGCCTGGGACAACGTGAAGTGGTCCGAGGAGCAGGC
CGCGGCGGCGGAGAGGAAAGTGCAGGAGAACAGCTCCCCGCTGGTGTGCCCGGAGAAGCAAGTTGATTAT
GAAGTCAATGCCCATAAATACTGGGATGACTTCTACAGAATCCATGAAAATGGGTTTTTCAAGGATAGAC
ACTGGCTTTTTACTGAGTTCCCTGAATTGGCACCTAGCCACAGTCACCTGACGGGTGTACCCTTGGAGAA
GCAGAGGAGTGACGTCTGTGAGGACGGACCTGGCTTGACAGCAGAACAGCACAAGTGTTCTTGTGCCAGC
CCTGGATGTGAGACTCAGGTGCCTCCCTTGGAAGAGCCAGTGACTCAGAAGCTCGGTCACCTAGAAATTA
GTGGTGAGGAATTTCCTGGCTCCTCTGCCACCTACCGAATACTTGAGGTTGGTTGTGGTGTAGGAAACAC
AGTCTTTCCAATTTTACAAACTAACAATAACCCAAACCTCTTCGTTTACTGTTGTGACTTTTCTGCCACG
GCTATTGAACTGCTCAAGACAAATTCACAATATGATCCTTCTCGCTGTTATGCCTTTGTTCATGATCTCT
GTGATGAAGATCAGAGTTACCCAGTGCCTGAGGACAGTCTTGATGTCATCGTTCTTATATTTGTTCTTTC
AGCAATTGTTCCAGACAAGATGCAGAAAGCGATCAGCAAGCTAAGCCGACTCCTGAAGCCTGGAGGGGTG
ATGCTTCTTCGAGACTATGGCCGCTATGACATGGCTCAACTTCGGTTTAAGAAAGGTCAGTGTCTATCTG
GAAACTTCTATGTGAGAGGTGATGGCACCAGAGTTTACTTCTTCACACAAGGTGAGCTGGATACGCTCTT
CACCGCTGCTGGCCTGGAGAAGGTGCAGAACCTGGTGGATCGCCGCTTGCAGGTGAATCGAGGGAAACAG
CTGACCATGTACCGCGTCTGGATTCAGTGCAAATACAGCAAGCCTCTAGCACTCCGCTCCAGCCAACATG
TGCCCATTCCCCACGCCACAGAAAGTTCTTCACATTCGGGGCTTTTGTAA

Translation (389 aa):
MAASFPEGVPETEDGKRPQFGHRFLSDPARVFHHNAWDNVKWSEEQAAAAERKVQENSSPLVCPEKQVDY
EVNAHKYWDDFYRIHENGFFKDRHWLFTEFPELAPSHSHLTGVPLEKQRSDVCEDGPGLTAEQHKCSCAS
PGCETQVPPLEEPVTQKLGHLEISGEEFPGSSATYRILEVGCGVGNTVFPILQTNNNPNLFVYCCDFSAT
AIELLKTNSQYDPSRCYAFVHDLCDEDQSYPVPEDSLDVIVLIFVLSAIVPDKMQKAISKLSRLLKPGGV
MLLRDYGRYDMAQLRFKKGQCLSGNFYVRGDGTRVYFFTQGELDTLFTAAGLEKVQNLVDRRLQVNRGKQ
LTMYRVWIQCKYSKPLALRSSQHVPIPHATESSSHSGLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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