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Report for CCDS25237.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25237.1 Public Mus musculus 11 Ankfn1 23 108 98 CCDS HistoryNCBI Gene:382543Re-query CCDS DB by CCDS ID:25237.1Re-query CCDS DB by GeneID:382543See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 25237.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050983.1 ENSMUSP00000049776.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050983.1Link to Ensembl Protein Viewer:ENSMUSP00000049776.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000050983Re-query CCDS DB by Protein ID:ENSMUSP00000049776
Original member Current member NCBI NM_172534.2 NP_766122.1 Accepted alive Link to Nucleotide Sequence:NM_172534.2Link to Protein Sequence:NP_766122.1Re-query CCDS DB by Nucleotide ID:NM_172534Re-query CCDS DB by Protein ID:NP_766122Link to BLAST:NP_766122.1

Chromosomal Locations for CCDS 25237.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 89391608 89392404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 89405487 89405700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 89411990 89412156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 89418847 89418880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGCCGCTCTCTGGGCCTCTCCACACTGCAGCTGTTCATTTTTGCAGCTACAGAGAGAAATTTATTAGTC
TGTATTGCCGCCTTTCTGCTGTTGTGGAGCTGGACTCTCTGAATACCCAACAGTCCCTGAGGGAGGCAAT
CTCAGACAGCGAGGTCGCAGCTGCCAAACAACGGCACCAGCAAGTGCTGGACTTTATTCAGCAAATTGAT
GAAGTCTGGCGTGAGATGAGATGGATCATGGATGCTCTACAGTATGCCCGGTACAAGCAACCAGTCTCTG
GCTTGCCCATCACTAAGCTGATAGACTCCTCCAGTGAGCAGAATCTAAAGAAGATCAGTTCTACGTCATC
ACACATAGACTGTCTTCCGTCAACATCCCCATCGCCAGAGATGCACAGAAGAAAGGCAGTGAGTGAGTCA
CAGCCCTGCTCGGATGAAGAAGGCTGCTCGGAAGTCTTCCTCCCCACAGACAGTGACTATGACTCCAGCG
ATGCCCTGAGCCCACGAGACCTGGACCTGGTTTACCTGTCATCACATGACATAGCCCAGCAGGCCCTCAG
CGGCCTCAGTGGCAGCGCCCCAGATGTCCTACAGGTGCATGACATGAAGGCCTCCATGGGACCTGGCCAG
GACCCTCAGGGCCCAGGGCAGGGTCCTGACACCGACCACTCATGTGTCGAGTTTCTCCACAGCCTGACCC
TCACGGGCTTGGCACCCAAGAACCATGCCAAGATGGTGGCAGGCACACGGCCGCCACTGGGCTTCTTGGG
AAAGCGGAAGCCAGGCAAGCACCAGCACTATGGTGGCTTCAGCCGCCACCACCGCTGGCTGCGCATGCAC
AGCGAGACGCAGTCCCTGTCACTCTCCGAAGGTGTTTACACCCAGCACCTGTCTCAGGCCTGCGGCCTGG
CTGAAGATCCTGGGGAGGCAGAGGGGCCTGGACCTGTGGTGGATGGGCCCCGAGGCCTGCCTCTGGCCCA
TGCAGCCAGCCTCCCAGAGGAGAGGAGGAGCTGCCTCCAAGACCCAAGGCGGCCCCTGCAGAGAGTCTAT
GTGGAACCCTATTCCGACACACTCGCAGGCCAGGATCCAAAGCTGTGGACCAGTTTGAGCCCTACCCCTG
CAGGCCGCAGCAGCCTCCCAAGCTCCACTAGTTCAGAGATGAGTCCAGACCCCACATCTCCAGTTTCAGA
AATATTAAGTAGTATGCTTTAG

Translation (403 aa):
MPLSGPLHTAAVHFCSYREKFISLYCRLSAVVELDSLNTQQSLREAISDSEVAAAKQRHQQVLDFIQQID
EVWREMRWIMDALQYARYKQPVSGLPITKLIDSSSEQNLKKISSTSSHIDCLPSTSPSPEMHRRKAVSES
QPCSDEEGCSEVFLPTDSDYDSSDALSPRDLDLVYLSSHDIAQQALSGLSGSAPDVLQVHDMKASMGPGQ
DPQGPGQGPDTDHSCVEFLHSLTLTGLAPKNHAKMVAGTRPPLGFLGKRKPGKHQHYGGFSRHHRWLRMH
SETQSLSLSEGVYTQHLSQACGLAEDPGEAEGPGPVVDGPRGLPLAHAASLPEERRSCLQDPRRPLQRVY
VEPYSDTLAGQDPKLWTSLSPTPAGRSSLPSSTSSEMSPDPTSPVSEILSSML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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