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Report for CCDS24764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24764.1 Public Mus musculus 11 2310033P09Rik 23 108 98 CCDS HistoryNCBI Gene:67862Re-query CCDS DB by CCDS ID:24764.1Re-query CCDS DB by GeneID:67862See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24764.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020719.6 ENSMUSP00000020719.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020719.6Link to Ensembl Protein Viewer:ENSMUSP00000020719.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000020719Re-query CCDS DB by Protein ID:ENSMUSP00000020719
Original member Current member NCBI NM_024210.2 NP_077172.1 Accepted alive Link to Nucleotide Sequence:NM_024210.2Link to Protein Sequence:NP_077172.1Re-query CCDS DB by Nucleotide ID:NM_024210Re-query CCDS DB by Protein ID:NP_077172Link to BLAST:NP_077172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077172.1 260 Q99LX5 260 100% 0 0

Chromosomal Locations for CCDS 24764.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59208429 59208673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59208820 59208865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59208969 59209051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59209128 59209200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59209308 59209393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59209973 59210104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59210227 59210344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (783 nt):
ATGTTCGGCTCCAATCGCGGTGGCGTGCGTGGCGGACAAGACCAGTTCAATTGGGAGGACGTGAAGACTG
ACAAGCAGAGGGAGAACTACTTGGGCAACTCGCTGATGGCGCCAGTAGGCCGCTGGCAGAAGGGCCGCGA
CCTCACCTGGTACGCGAAGGACCGCGCGCCGTGTACCGGCCCGAGCCGTGAGGAAGAGCTGGCAGCCGTG
CGCGAGGCGGAGCGTGAGGCGCTGCTGGCCGCACTTGGTTACAAGAACGTGAGGAAACAGCCCACCGGCC
TGAGCAAGGAGGACTTCGTGGAGATCTGCAAACGGGAAGGAGGAGACCCCGAGGAGAAGGGCGTGGACCG
GCTCCTGGGCTTGGGCAGCGCCAGTGGCTCCGCGGGCCGTGTGGCGCTATCCCGAGAAGACAAAGAGGCT
GCCAAACTTGGGCTGTCAGTGTTCACGCACCACCGTGTGGACAGCGAAGGCCCAAGCACTGCCCCAACTG
CTCCCAGGAAGAAGCCTCGCGCTGAGGACAAGGTCGAACCGGATGCAGAGAGCCATAAGAAAAGCAAGAA
AGAAAAGAAGAAAAAGAAGAAGAAACACAAGAAACACAAAAAGAAGAAAGACAAAGAACATAAGAGGGAG
GCTGACAGCTGCTCCTCATCTCCCTCTCCTCCCCGGCCCAGACACCAGAGACATTCTGACTTCTCTCCCT
GCTCTAAGAGGAAGCGGGAACATAGCCAGGACAGTGGAAGGAATCCATCCCGCAGACGACAAGACAGAAG
CTCTGATGACTGA

Translation (260 aa):
MFGSNRGGVRGGQDQFNWEDVKTDKQRENYLGNSLMAPVGRWQKGRDLTWYAKDRAPCTGPSREEELAAV
REAEREALLAALGYKNVRKQPTGLSKEDFVEICKREGGDPEEKGVDRLLGLGSASGSAGRVALSREDKEA
AKLGLSVFTHHRVDSEGPSTAPTAPRKKPRAEDKVEPDAESHKKSKKEKKKKKKKHKKHKKKKDKEHKRE
ADSCSSSPSPPRPRHQRHSDFSPCSKRKREHSQDSGRNPSRRRQDRSSDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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