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Report for CCDS2455.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2455.1 Public Homo sapiens 2 ACSL3 24 110 108 CCDS HistoryNCBI Gene:2181Re-query CCDS DB by CCDS ID:2455.1Re-query CCDS DB by GeneID:2181See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2455.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357430.8 ENSP00000350012.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357430.8Link to Ensembl Protein Viewer:ENSP00000350012.3Re-query CCDS DB by Nucleotide ID:ENST00000357430Re-query CCDS DB by Protein ID:ENSP00000350012
Original member Current member EBI ENST00000392066.7 ENSP00000375918.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392066.7Link to Ensembl Protein Viewer:ENSP00000375918.3Re-query CCDS DB by Nucleotide ID:ENST00000392066Re-query CCDS DB by Protein ID:ENSP00000375918
Original member Current member EBI ENST00000680147.1 ENSP00000504861.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680147.1Link to Ensembl Protein Viewer:ENSP00000504861.1Re-query CCDS DB by Nucleotide ID:ENST00000680147Re-query CCDS DB by Protein ID:ENSP00000504861
Original member Current member EBI ENST00000679558.1 ENSP00000504907.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679558.1Link to Ensembl Protein Viewer:ENSP00000504907.1Re-query CCDS DB by Nucleotide ID:ENST00000679558Re-query CCDS DB by Protein ID:ENSP00000504907
Original member Current member EBI ENST00000680251.1 ENSP00000505400.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680251.1Link to Ensembl Protein Viewer:ENSP00000505400.1Re-query CCDS DB by Nucleotide ID:ENST00000680251Re-query CCDS DB by Protein ID:ENSP00000505400
Original member Current member EBI ENST00000681383.1 ENSP00000505654.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681383.1Link to Ensembl Protein Viewer:ENSP00000505654.1Re-query CCDS DB by Nucleotide ID:ENST00000681383Re-query CCDS DB by Protein ID:ENSP00000505654
Original member Current member EBI ENST00000680395.1 ENSP00000505793.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680395.1Link to Ensembl Protein Viewer:ENSP00000505793.1Re-query CCDS DB by Nucleotide ID:ENST00000680395Re-query CCDS DB by Protein ID:ENSP00000505793
Original member Current member EBI ENST00000681697.1 ENSP00000505856.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681697.1Link to Ensembl Protein Viewer:ENSP00000505856.1Re-query CCDS DB by Nucleotide ID:ENST00000681697Re-query CCDS DB by Protein ID:ENSP00000505856
Original member Current member EBI ENST00000680921.1 ENSP00000505940.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680921.1Link to Ensembl Protein Viewer:ENSP00000505940.1Re-query CCDS DB by Nucleotide ID:ENST00000680921Re-query CCDS DB by Protein ID:ENSP00000505940
Original member Current member EBI ENST00000679514.1 ENSP00000506361.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679514.1Link to Ensembl Protein Viewer:ENSP00000506361.1Re-query CCDS DB by Nucleotide ID:ENST00000679514Re-query CCDS DB by Protein ID:ENSP00000506361
Original member Current member EBI ENST00000680684.1 ENSP00000506468.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680684.1Link to Ensembl Protein Viewer:ENSP00000506468.1Re-query CCDS DB by Nucleotide ID:ENST00000680684Re-query CCDS DB by Protein ID:ENSP00000506468
Original member Current member NCBI NM_001354158.2 NP_001341087.1 Accepted alive Link to Nucleotide Sequence:NM_001354158.2Link to Protein Sequence:NP_001341087.1Re-query CCDS DB by Nucleotide ID:NM_001354158Re-query CCDS DB by Protein ID:NP_001341087Link to BLAST:NP_001341087.1
Original member Current member NCBI NM_001354159.2 NP_001341088.1 Accepted alive Link to Nucleotide Sequence:NM_001354159.2Link to Protein Sequence:NP_001341088.1Re-query CCDS DB by Nucleotide ID:NM_001354159Re-query CCDS DB by Protein ID:NP_001341088Link to BLAST:NP_001341088.1
Original member Current member NCBI NM_004457.5 NP_004448.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004457.5Link to Protein Sequence:NP_004448.2Re-query CCDS DB by Nucleotide ID:NM_004457Re-query CCDS DB by Protein ID:NP_004448Link to BLAST:NP_004448.2
Original member Current member NCBI NM_203372.3 NP_976251.1 Accepted alive Link to Nucleotide Sequence:NM_203372.3Link to Protein Sequence:NP_976251.1Re-query CCDS DB by Nucleotide ID:NM_203372Re-query CCDS DB by Protein ID:NP_976251Link to BLAST:NP_976251.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341087.1 720 O95573 720 100% 0 0
NP_001341088.1 720 O95573 720 100% 0 0
NP_004448.2 720 O95573 720 100% 0 0
NP_976251.1 720 O95573 720 100% 0 0

Chromosomal Locations for CCDS 2455.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 222908773 222909150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222916319 222916496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222918046 222918155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222919064 222919202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222921280 222921430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222922708 222922831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222923078 222923149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222924456 222924595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222927017 222927189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222928862 222928936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222930621 222930812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222933166 222933280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222934530 222934687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222941497 222941654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2163 nt):
ATGAATAACCACGTGTCTTCAAAACCATCTACCATGAAGCTAAAACATACCATCAACCCTATTCTTTTAT
ATTTTATACATTTTCTAATATCACTTTATACTATTTTAACATACATTCCGTTTTATTTTTTCTCCGAGTC
AAGACAAGAAAAATCAAACCGAATTAAAGCAAAGCCTGTAAATTCAAAACCTGATTCTGCATACAGATCT
GTTAATAGTTTGGATGGTTTGGCTTCAGTATTATACCCTGGATGTGATACTTTAGATAAAGTTTTTACAT
ATGCAAAAAACAAATTTAAGAACAAAAGACTCTTGGGAACACGTGAAGTTTTAAATGAGGAAGATGAAGT
ACAACCAAATGGAAAAATTTTTAAAAAGGTTATTCTTGGACAGTATAATTGGCTTTCCTATGAAGATGTC
TTTGTTCGAGCCTTTAATTTTGGAAATGGATTACAGATGTTGGGTCAGAAACCAAAGACCAACATCGCCA
TCTTCTGTGAGACCAGGGCCGAGTGGATGATAGCTGCACAGGCGTGTTTTATGTATAATTTTCAGCTTGT
TACATTATATGCCACTCTAGGAGGTCCAGCCATTGTTCATGCATTAAATGAAACAGAGGTGACCAACATC
ATTACTAGTAAAGAACTCTTACAAACAAAGTTGAAGGATATAGTTTCTTTGGTCCCACGCCTGCGGCACA
TCATCACTGTTGATGGAAAGCCACCGACCTGGTCCGAGTTCCCCAAGGGCATCATTGTGCATACCATGGC
TGCAGTGGAGGCCCTGGGAGCCAAGGCCAGCATGGAAAACCAACCTCATAGCAAACCATTGCCCTCAGAT
ATTGCAGTAATCATGTACACAAGTGGATCCACAGGACTTCCAAAGGGAGTCATGATCTCACATAGTAACA
TTATTGCTGGTATAACTGGGATGGCAGAAAGGATTCCAGAACTAGGAGAGGAAGATGTCTACATTGGATA
TTTGCCTCTGGCCCATGTTCTAGAATTAAGTGCTGAGCTTGTCTGTCTTTCTCACGGATGCCGCATTGGT
TACTCTTCACCACAGACTTTAGCAGATCAGTCTTCAAAAATTAAAAAAGGAAGCAAAGGGGATACATCCA
TGTTGAAACCAACACTGATGGCAGCAGTTCCGGAAATCATGGATCGGATCTACAAAAATGTCATGAATAA
AGTCAGTGAAATGAGTAGTTTTCAACGTAATCTGTTTATTCTGGCCTATAATTACAAAATGGAACAGATT
TCAAAAGGACGTAATACTCCACTGTGCGACAGCTTTGTTTTCCGGAAAGTTCGAAGCTTGCTAGGGGGAA
ATATTCGTCTCCTGTTGTGTGGTGGCGCTCCACTTTCTGCAACCACGCAGCGATTCATGAACATCTGTTT
CTGCTGTCCTGTTGGTCAGGGATACGGGCTCACTGAATCTGCTGGGGCTGGAACAATTTCCGAAGTGTGG
GACTACAATACTGGCAGAGTGGGAGCACCATTAGTTTGCTGTGAAATCAAATTAAAAAACTGGGAGGAAG
GTGGATACTTTAATACTGATAAGCCACACCCCAGGGGTGAAATTCTTATTGGGGGCCAAAGTGTGACAAT
GGGGTACTACAAAAATGAAGCAAAAACAAAAGCTGATTTCTTTGAAGATGAAAATGGACAAAGGTGGCTC
TGTACTGGGGATATTGGAGAGTTTGAACCCGATGGATGCTTAAAGATTATTGATCGTAAAAAGGACCTTG
TAAAACTACAGGCAGGGGAATATGTTTCTCTTGGGAAAGTAGAGGCAGCTTTGAAGAATCTTCCACTAGT
AGATAACATTTGTGCATATGCAAACAGTTATCATTCTTATGTCATTGGATTTGTTGTGCCAAATCAAAAG
GAACTAACTGAACTAGCTCGAAAGAAAGGACTTAAAGGGACTTGGGAGGAGCTGTGTAACAGTTGTGAAA
TGGAAAATGAGGTACTTAAAGTGCTTTCCGAAGCTGCTATTTCAGCAAGTCTGGAAAAGTTTGAAATTCC
AGTAAAAATTCGTTTGAGTCCTGAACCGTGGACCCCTGAAACTGGTCTGGTGACAGATGCCTTCAAGCTG
AAACGCAAAGAGCTTAAAACACATTACCAGGCGGACATTGAGCGAATGTATGGAAGAAAATAA

Translation (720 aa):
MNNHVSSKPSTMKLKHTINPILLYFIHFLISLYTILTYIPFYFFSESRQEKSNRIKAKPVNSKPDSAYRS
VNSLDGLASVLYPGCDTLDKVFTYAKNKFKNKRLLGTREVLNEEDEVQPNGKIFKKVILGQYNWLSYEDV
FVRAFNFGNGLQMLGQKPKTNIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHALNETEVTNI
ITSKELLQTKLKDIVSLVPRLRHIITVDGKPPTWSEFPKGIIVHTMAAVEALGAKASMENQPHSKPLPSD
IAVIMYTSGSTGLPKGVMISHSNIIAGITGMAERIPELGEEDVYIGYLPLAHVLELSAELVCLSHGCRIG
YSSPQTLADQSSKIKKGSKGDTSMLKPTLMAAVPEIMDRIYKNVMNKVSEMSSFQRNLFILAYNYKMEQI
SKGRNTPLCDSFVFRKVRSLLGGNIRLLLCGGAPLSATTQRFMNICFCCPVGQGYGLTESAGAGTISEVW
DYNTGRVGAPLVCCEIKLKNWEEGGYFNTDKPHPRGEILIGGQSVTMGYYKNEAKTKADFFEDENGQRWL
CTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFVVPNQK
ELTELARKKGLKGTWEELCNSCEMENEVLKVLSEAAISASLEKFEIPVKIRLSPEPWTPETGLVTDAFKL
KRKELKTHYQADIERMYGRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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