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Report for CCDS24440.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24440.1 Public Mus musculus 11 Grb10 23 108 98 CCDS HistoryNCBI Gene:14783Re-query CCDS DB by CCDS ID:24440.1Re-query CCDS DB by GeneID:14783See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24440.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093321.11 ENSMUSP00000091011.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093321.11Link to Ensembl Protein Viewer:ENSMUSP00000091011.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000093321Re-query CCDS DB by Protein ID:ENSMUSP00000091011
Original member Current member NCBI NM_010345.4 NP_034475.2 Accepted alive Link to Nucleotide Sequence:NM_010345.4Link to Protein Sequence:NP_034475.2Re-query CCDS DB by Nucleotide ID:NM_010345Re-query CCDS DB by Protein ID:NP_034475Link to BLAST:NP_034475.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034475.2 596 Q60760-2 596 100% 0 0

Chromosomal Locations for CCDS 24440.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 11933463 11933609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11934199 11934292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11936718 11936805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11937001 11937067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11937807 11937923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11938410 11938484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11943882 11943980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11944816 11944926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11945495 11945632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11945964 11946032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11946687 11946802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11951503 11951659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11954744 11954908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11967532 11967685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 11970423 11970616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGAACAACGATATTAACTCGTCCGTGGAAAGCCTTAACTCAGCTTGCAACATGCAGTCTGATACTGATA
CTGCACCACTTCTTGAGGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATCTAGCTCCCGGGGACAGCC
ACAGGCGTCCCCGAGGCAGAAAATGCAACGCTCGCAGCCTGTGCACATTCTCAGGCGCCTTCAGGAGGAA
GACCAGCAGTTAAGAACTGCATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGCTCACTGGTGCGGCCC
CTGGGAGCCCTCCTTCGGTTGCTCCTAGCTCCTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATTT
CCCTCCAGGCTTTCAGCTGTCGAAACTCACCCGTCCAGGTCTGTGGACAAAGACCACTGCGAGATTTTCA
AAGAAACAACCTAAGAACCAGTGTCCAACCGACACTGTGAATCCAGTGGCACGGATGCCCACTTCACAGA
TGGAGAAGCTGAGGCTCAGAAAGGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAAAGTGGTGGAGAT
TCTAACCGACATGACAGCCAGGGACCTGTGCCAGCTGCTGGTTTACAAAAGTCACTGTGTGGATGACAAC
AGCTGGACTCTGGTGGAACACCACCCACAACTGGGATTAGAGAGGTGCCTGGAGGACCATGAGATCGTGG
TCCAAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTCTTATTCAGAAAGAATTATGCGAAGTACGAGTT
CTTTAAGAATCCAGTGAACTTCTTCCCGGATCAGATGGTCAATTGGTGCCAGCAGTCCAACGGTGGCCAG
GCGCAGCTTCTGCAGAATTTTCTGAACACCAGCAGCTGCCCTGAGATCCAGGGGTTCTTGCAGGTGAAAG
AGGTAGGACGCAAGTCTTGGAAGAAGCTGTATGTGTGCCTGCGCAGATCTGGCCTCTATTACTCCACCAA
GGGGACTTCAAAAGAACCCAGACACCTGCAGCTGCTGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTG
ATTGCTGGAAAGAAGCAGTACAACGCGCCGAATGAACATGGGATGTGCATCAAGCCAAACAAAGCGAAGA
CCGAGATGAAGGAGCTTCGTCTGCTCTGTGCCGAAGATGAGCAGATCCGTACTTGCTGGATGACTGCCTT
CAGACTGCTCAAGTACGGAATGCTCCTGTACCAAAACTATCGCATCCCACAGAGGAAGGGTCTGCCCCCT
CCTTTCAACGCACCTATGCGCAGTGTTTCTGAGAATTCTCTTGTGGCCATGGATTTTTCTGGACAAATCG
GAAGAGTGATCGATAACCCGGCTGAAGCCCAGAGTGCTGCCCTGGAAGAGGGCCATGCCTGGCGTAAGCG
GAGCACACGGATGAATATCCTAAGCAGCCAAAGCCCACTGCATCCTTCTACCCTGAATGCAGTGATTCAC
AGGACTCAGCATTGGTTCCATGGACGTATCTCCCGCGAGGAGTCTCACAGGATCATCAAGCAACAAGGTC
TCGTGGACGGGCTGTTCCTCCTTCGTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTGACACTGTGCCA
TCACCAGAAGATTAAAAACTTCCAGATCTTACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCTGGAT
GATGGGAACACCAAGTTCTCCGATCTGATCCAGCTGGTCGACTTCTACCAGCTCAACAAAGGTGTTCTGC
CCTGCAAGCTGAAACACCACTGCATCCGCGTGGCCTTATGA

Translation (596 aa):
MNNDINSSVESLNSACNMQSDTDTAPLLEDGQHASNQGAASSSRGQPQASPRQKMQRSQPVHILRRLQEE
DQQLRTASLPAIPNPFPELTGAAPGSPPSVAPSSLPPPPSQPPAKHFPPGFQLSKLTRPGLWTKTTARFS
KKQPKNQCPTDTVNPVARMPTSQMEKLRLRKDVKVFSEDGTSKVVEILTDMTARDLCQLLVYKSHCVDDN
SWTLVEHHPQLGLERCLEDHEIVVQVESTMPSESKFLFRKNYAKYEFFKNPVNFFPDQMVNWCQQSNGGQ
AQLLQNFLNTSSCPEIQGFLQVKEVGRKSWKKLYVCLRRSGLYYSTKGTSKEPRHLQLLADLEESSIFYL
IAGKKQYNAPNEHGMCIKPNKAKTEMKELRLLCAEDEQIRTCWMTAFRLLKYGMLLYQNYRIPQRKGLPP
PFNAPMRSVSENSLVAMDFSGQIGRVIDNPAEAQSAALEEGHAWRKRSTRMNILSSQSPLHPSTLNAVIH
RTQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFTLD
DGNTKFSDLIQLVDFYQLNKGVLPCKLKHHCIRVAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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