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Report for CCDS2435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2435.1 Public Homo sapiens 2 ZFAND2B 24 110 108 CCDS HistoryNCBI Gene:130617Re-query CCDS DB by CCDS ID:2435.1Re-query CCDS DB by GeneID:130617See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2435.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000289528.10 ENSP00000289528.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000289528.10Link to Ensembl Protein Viewer:ENSP00000289528.5Re-query CCDS DB by Nucleotide ID:ENST00000289528Re-query CCDS DB by Protein ID:ENSP00000289528
Original member Current member EBI ENST00000409336.5 ENSP00000386898.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409336.5Link to Ensembl Protein Viewer:ENSP00000386898.1Re-query CCDS DB by Nucleotide ID:ENST00000409336Re-query CCDS DB by Protein ID:ENSP00000386898
Original member Current member EBI ENST00000444522.6 ENSP00000411334.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444522.6Link to Ensembl Protein Viewer:ENSP00000411334.3Re-query CCDS DB by Nucleotide ID:ENST00000444522Re-query CCDS DB by Protein ID:ENSP00000411334
Original member Current member NCBI NM_001270998.2 NP_001257927.1 Accepted alive Link to Nucleotide Sequence:NM_001270998.2Link to Protein Sequence:NP_001257927.1Re-query CCDS DB by Nucleotide ID:NM_001270998Re-query CCDS DB by Protein ID:NP_001257927Link to BLAST:NP_001257927.1
Original member Current member NCBI NM_138802.3 NP_620157.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138802.3Link to Protein Sequence:NP_620157.1Re-query CCDS DB by Nucleotide ID:NM_138802Re-query CCDS DB by Protein ID:NP_620157Link to BLAST:NP_620157.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257927.1 257 Q8WV99-1 257 100% 0 0
NP_620157.1 257 Q8WV99-1 257 100% 0 0

Chromosomal Locations for CCDS 2435.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219206988 219207042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219207327 219207421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219207648 219207779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219207887 219208038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219208256 219208348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219208426 219208486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219208572 219208639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219208977 219209049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219209262 219209306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGAGTTTCCGGACCTCGGCGCTCACTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCTGCCGCTTA
AGTGTGATGCCTGCTCAGGCATCTTCTGCGCAGACCATGTGGCCTACGCCCAGCATCACTGTGGATCTGC
TTACCAAAAGGATATCCAGGTACCTGTGTGCCCTCTCTGTAATGTGCCTGTGCCTGTGGCCAGAGGGGAG
CCCCCTGACCGTGCTGTGGGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTA
AGATCTTCACCAATAAGTGTGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACG
CTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCA
ACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCC
CAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCC
TCCAGTGATTGCTTTGCAGAATGGCCTGAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTG
GCAGAAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAG
CCAGTGAGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTG
CTAG

Translation (257 aa):
MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPVPVARGE
PPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHP
TSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMSL
AETKPQVPSCQEEEDLALAQALSASEAEYQRQQAQSRSSKPSNCSLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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