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Report for CCDS24299.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24299.1 Public Mus musculus 10 Bloc1s1 23 108 98 CCDS HistoryNCBI Gene:14533Re-query CCDS DB by CCDS ID:24299.1Re-query CCDS DB by GeneID:14533See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24299.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026405.9 ENSMUSP00000026405.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026405.9Link to Ensembl Protein Viewer:ENSMUSP00000026405.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000026405Re-query CCDS DB by Protein ID:ENSMUSP00000026405
Original member Current member NCBI NM_015740.3 NP_056555.2 Accepted alive Link to Nucleotide Sequence:NM_015740.3Link to Protein Sequence:NP_056555.2Re-query CCDS DB by Nucleotide ID:NM_015740Re-query CCDS DB by Protein ID:NP_056555Link to BLAST:NP_056555.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056555.2 125 O55102 125 100% 0 0

Chromosomal Locations for CCDS 24299.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128919997 128920107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128920559 128920691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128922654 128922726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128923375 128923435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGCTGTCCCGCCTGCTCAAAGAACACCAAGCCAAGCAGAACGAACGCAAGGAGCTGCAGGAGAAGAGGA
GGAGAGAAGCTATCGCTGCAGCGACCTGCCTGACCGAAGCGTTGGTGGATCACCTCAACGTGGGTGTGGC
CCAGGCCTACATGAACCAGAGAAAGCTGGACCATGAGGTGAAGACTCTACAGGTCCAGGCTGCCCAGTTT
GCCAAGCAGACAGGCCAGTGGATTGGAATGGTGGAGAACTTCAACCAGGCACTTAAGGAAATTGGGGATG
TGGAGAACTGGGCTAGGAGCATCGAGCTGGACATGCGCACCATTGCCACTGCGCTGGAATACGTCTACAA
AGGGCAGCTGCAGTCTGCACCATCCTAG

Translation (125 aa):
MLSRLLKEHQAKQNERKELQEKRRREAIAAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQAAQF
AKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYKGQLQSAPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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