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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS24278.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
24278.1 |
Public |
Mus musculus |
10 |
Smarcc2 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 24278.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000026433.8 |
ENSMUSP00000026433.7 |
Accepted |
alive |
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NCBI |
NM_198160.2 |
NP_937803.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_937803.1 |
1099 |
Q6PDG5-2 |
1099 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 24278.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3300 nt): ATGGCGGTGCGGAAGAAGGACGGCGGCCCCAACGTGAAGTACTACGAGGCCGCGGACACCGTGACCCAGT TCGACAACGTGCGGCTCTGGCTCGGCAAGAACTACAAGAAGTACATACAAGCAGAACCGCCAACCAACAA GTCTCTGTCCAGCCTGGTGGTGCAGTTGCTCCAGTTTCAGGAAGAGGTTTTTGGCAAACATGTCAGCAAC GCACCGCTTACTAAACTGCCGATCAAATGTTTCCTAGATTTCAAAGCAGGAGGATCCCTCTGCCATATTC TTGCAGCTGCCTACAAATTCAAGAGTGACCAGGGATGGCGGCGTTACGATTTCCAGAATCCATCACGCAT GGACCGCAATGTGGAAATGTTCATGACCATTGAGAAGTCCTTGGTACAGAATAATTGCCTGTCACGACCT AACATTTTCCTCTGCCCAGAAATTGAGCCCAAACTGCTAGGGAAATTAAAAGACATTGTTAAGAGACACC AGGGAACCATCTCTGAGGATAAGAGCAATGCCTCCCATGTTGTGTATCCTGTCCCAGGGAACCTAGAAGA AGAGGAATGGGTACGGCCAGTCATGAAGAGGGATAAACAGGTTCTTCTGCACTGGGGCTACTATCCTGAC AGCTACGACACGTGGATCCCAGCGAGTGAAATTGAAGCATCTGTGGAGGACGCTCCCACTCCTGAGAAAC CGAGGAAGGTCCATGCGAAGTGGATCCTCGACACCGACACATTCAACGAGTGGATGAATGAGGAAGACTA CGAAGTCAGTGACGACAAAAGCCCAGTCTCCCGCAGGAAGAAGATCTCAGCCAAGACGCTGACAGACGAG GTAAACAGCCCAGATTCAGACAGACGAGACAAGAAGGGGGGCAACTATAAGAAGAGGAAGCGCTCTCCCT CTCCTTCACCCACCCCAGAGGCTAAGAAGAAAAACGCTAAGAAAGGACCCTCAACACCTTATACCAAGTC AAAGCGAGGCCACAGAGAAGAGGAACAAGAAGACCTGACAAAAGACATGGATGAGCCCTCTCCAGTCCCA AACGTGGAAGAGGTGACACTCCCCAAAACAGTCAACACTAAAAAGGACTCTGAGTCAGCCCCAGTCAAAG GCGGCACCATGACTGACCTGGATGAACAGGACGATGAAAGCATGGAGACCACCGGCAAGGACGAGGATGA GAACAGCACGGGCAACAAAGGCGAGCAGACGAAGAACCCGGACCTGCATGAGGACAATGTGACCGAGCAG ACCCACCACATCATCATCCCCAGCTACGCCGCCTGGTTTGACTACAACAGCGTCCATGCCATTGAACGGA GGGCTCTTCCTGAGTTCTTCAACGGCAAGAACAAGTCTAAGACTCCAGAGATCTACCTGGCGTATCGGAA CTTCATGATTGACACTTACCGACTGAATCCCCAGGAGTATCTAACATCTACTGCCTGTCGGCGGAATTTG GCGGGTGATGTCTGCGCTATCATGAGGGTCCATGCCTTCCTGGAACAGTGGGGTCTTATTAACTACCAGG TAGATGCTGAGAGCCGACCAACCCCAATGGGGCCTCCACCCACCTCTCACTTCCATGTCTTGGCGGACAC ACCATCAGGGCTGGTTCCTCTTCAGCCGAAGCCTCCACAGCAGAGCTCTGCTTCCCAGCAAATGCTGAAC TTCCCTGAGAAGGGCAAGGAGAAACCAGCAGACATGCAGAATTTTGGGCTGCGCACAGACATGTACACAA AGAAGAACGTCCCCTCCAAGAGCAAAGCTGCAGCAAGTGCCACTCGGGAATGGACGGAGCAGGAGACTCT GCTGCTCCTGGAGGCTTTGGAAATGTACAAGGACGACTGGAACAAAGTATCTGAGCACGTGGGAAGCCGC ACGCAGGACGAGTGCATCTTGCATTTTCTCCGCCTTCCCATTGAAGACCCATACCTGGAGGACTCGGAGG CTTCTCTAGGCCCTCTGGCCTACCAACCCATCCCCTTCAGTCAGTCAGGCAACCCTGTTATGAGCACCGT TGCCTTCCTGGCCTCTGTCGTCGATCCCCGAGTTGCCTCTGCTGCTGCGAAGTCAGCCCTAGAAGAGTTC TCAAAAATGAAGGAAGAGGTGCCCACAGCTTTGGTGGAAGCCCACGTGCGTAAGGTCGAAGAAGCGGCCA AAGTCACAGGCAAGGCCGACCCAGCCTTTGGTCTGGAGAGTAGCGGCATCGCAGGGACTGCCTCTGATGA GCCTGAGCGCATTGAGGAAAGCGGGACTGAGGAGGCACGGCCAGAGGGCCAGGCAGCAGATGAGAAGAAG GAGCCTAAGGAACCACGGGAAGGAGGGGGCGCTGTGGAGGAAGAAGCAAAGGAGGAAATAAGTGAGGTCC CCAAGAAAGATGAAGAGAAAGGGAAAGAAGGTGACAGTGAGAAGGAGTCTGAGAAGAGTGACGGGGACCC GATAGTTGATCCTGAGAAAGACAAGGAACCAACAGAAGGGCAGGAGGAAGTGCTAAAGGAAGTGGCAGAG CCAGAGGGGGAGAGGAAAACCAAGGTGGAGCGTGACATTGGTGAAGGCAACCTGTCCACAGCTGCAGCCG CAGCCCTGGCCGCTGCTGCAGTCAAGGCCAAGCACTTGGCTGCAGTTGAGGAGAGAAAGATCAAGTCTTT GGTGGCTCTGCTGGTAGAGACCCAAATGAAGAAACTAGAGATCAAACTCCGACATTTTGAGGAGCTGGAG ACAATAATGGACCGGGAGCGAGAGGCGCTGGAATACCAGAGGCAGCAGCTCCTGGCCGACCGGCAAGCCT TCCACATGGAGCAGCTGAAGTATGCAGAGATGAGGGCCCGGCAGCAGCACTTCCAGCAGATGCACCAGCA GCAGCAGCAGCAGCCACCAACCTTGCCCCCAGGCTCCCAGCCCATACCTCCCACCGGGGCTGCTGGACCA CCTACAGTCCATGGTCTAGCTGTGCCTCCAGCCGCTGTGGCCTCTGCCCCTCCTGGCAGTGGGGCCCCTC CTGGAAGCTTGGGCCCTTCTGAACAGATTGGGCAGGCAGGGACAACTGCAGGGCCACAGCAGCCACAACA AGCTGGAGCCCCTCAGCCTGGGGCAGTCCCACCAGGGGTACCCCCCCCTGGACCCCATGGCCCCTCACCG TTCCCCAACCAACCAACTCCTCCCTCAATGATGCCAGGGGCAGTGCCAGGCAGCGGGCACCCAGGCGTGG CGGACCCAGGCACCCCGCTGCCTCCAGACCCCACAGCTCCAAGCCCAGGCACAGTCACCCCTGTGCCACC TCCACAGTGA
Translation (1099 aa): MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSN APLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRP NIFLCPEIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPD SYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVSDDKSPVSRRKKISAKTLTDE VNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVP NVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQDDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNL AGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKPPQQSSASQQMLN FPEKGKEKPADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEF SKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDEPERIEESGTEEARPEGQAADEKK EPKEPREGGGAVEEEAKEEISEVPKKDEEKGKEGDSEKESEKSDGDPIVDPEKDKEPTEGQEEVLKEVAE PEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELE TIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQQPPTLPPGSQPIPPTGAAGP PTVHGLAVPPAAVASAPPGSGAPPGSLGPSEQIGQAGTTAGPQQPQQAGAPQPGAVPPGVPPPGPHGPSP FPNQPTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ
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