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Report for CCDS24166.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24166.1 Public Mus musculus 10 Osbpl8 23 108 98 CCDS HistoryNCBI Gene:237542Re-query CCDS DB by CCDS ID:24166.1Re-query CCDS DB by GeneID:237542See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24166.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095310.2 ENSMUSP00000092948.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095310.2Link to Ensembl Protein Viewer:ENSMUSP00000092948.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000095310Re-query CCDS DB by Protein ID:ENSMUSP00000092948
Original member Current member NCBI NM_001003717.1 NP_001003717.1 Accepted alive Link to Nucleotide Sequence:NM_001003717.1Link to Protein Sequence:NP_001003717.1Re-query CCDS DB by Nucleotide ID:NM_001003717Re-query CCDS DB by Protein ID:NP_001003717Link to BLAST:NP_001003717.1

Chromosomal Locations for CCDS 24166.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 111233600 111233690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111255688 111255758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111263180 111263257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111265535 111265636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111267605 111267808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111269358 111269442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111270491 111270662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111272074 111272311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111273026 111273210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111274991 111275072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111276460 111276558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111277247 111277343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111280290 111280388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111282127 111282224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111284330 111284419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111286116 111286252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111287827 111288012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111288693 111288780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111289789 111289894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111291491 111291593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 111293092 111293224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2544 nt):
ATGAGTCAGCGCCAAGGCAGAGACGCTAACCCAACCCCAACTAGAGATCTGCCTCAGCCTTCTCTCAGCC
CCGCCAGCCTTCACAGCCAGGGTTTTGAAAGAGGAAAAGAAGACATTTCTCAAAATAAAGATGACTCTTC
ACTTTCAATGTCAAAGAGCAAGTCTGAATCTAAACTATATAATGGCTCAGAAAAGGACAGTTCAACTTCA
AGTAAACTCACGAAGAAAGAGTCTCTTAAGGTACAAAAGAAAAACTACCGTGAAGAGAAGAAGAGAGCCA
CGAAGGAGTTACTCAGCACCATCACAGACCCCTCTGTCATTGTCATGGCCGACTGGCTGAAGATTCGTGG
TACCCTGAAGAGCTGGACCAAGCTGTGGTGTGTGTTGAAACCTGGCGTGCTTCTGATCTATAAAACACAA
AAAAATGGTCAGTGGGTCGGAACAGTCCTTCTGAATGCTTGTGAGATCATTGAACGTCCATCAAAAAAGG
ATGGCTTTTGTTTCAAGCTTTTCCATCCTTTGGAGCAGTCTATTTGGGCAGTGAAGGGTCCTAAAGGTGA
AGCGGTTGGCTCCATAACCCAGCCTCTACCTAGCAGCTACTTGATTATCCGAGCTACTTCAGAGTCAGAT
GGAAGGTGCTGGATGGATGCTTTGGAGTTGGCTTTGAAGTGTTCCAGTCTCCTTAAGCGGACCATGGTGA
GGGAGGGGAAGGAGCACGACCTGAGCATCTCCTCAGACAGCACACACGTGACGCTGTATGGCTTACTGCG
CGCTAACAATCTCCACAGTGGCGACAACTTCCAGTTGAATGACAGTGAGATCGAAAGACAGCACTTTAAG
GACCAAGATTTGTACTCTGATAAATCTGACAAGGAGAACGACCCGGAGCACGATGAGTCTGACAACGAGG
TGCTGGGGAAGAGCGAGGAGAGCGACACAGACACGTCCGAAAGGCAAGACGACTCGTACATCGACCCTGA
GCCTGTGGAGCCCTTAAAGGAGACCACCTACATGGAGCAGAGCCACGAAGAACTGGGAGAGGCAGGTGAG
GCCTCTCAAACGGAAACTGTGTCTGAAGAAAACAAAAGCCTTATCTGGACGCTGCTCAAGCAAGTCCGTC
CCGGCATGGACCTATCCAGGGTGGTTCTTCCTACGTTTATTTTGGAGCCCCGCTCTTTCCTGGATAAGCT
TTCAGATTACTACTACCACGCCGATTTCCTGTCTGAAGCTGCTCTAGAAGAAAATCCGTATTTCCGTTTG
AAGAAAGTCGTGAAATGGTATTTGTCAGGATTTTATAAGAAGCCAAAGGGACTAAAGAAACCATATAATC
CTATACTTGGTGAGACTTTCCGATGTTTATGGATTCATCCCAGAACAAACAGCAAAACTTTCTATATTGC
TGAACAGGTGTCCCATCACCCACCAATATCTGCCTTTTATGTCAGTAACCGGAAAGATGGGTTTTGCCTT
AGTGGTAGCATCCTGGCTAAGTCCAAGTTTTATGGAAACTCGTTATCTGCCATATTGGAGGGAGAAGCCC
GGTTAACTTTCTTGAACAGAGGTGAAGATTACGTCATGACAATGCCATATGCTCACTGTAAAGGAATTCT
TTATGGCACAATGACCCTGGAGCTTGGTGGAACTGTCAATATTACCTGTCAGAAGACTGGATACAGTGCG
ATACTTGAATTTAAACTAAAGCCATTTCTAGGGAGTAGTGATTATGTTAACCAAATATCAGGGAAACTTA
AATTGGGAAAAGAAGTCCTAGCTACTTTGGAAGGCCATTGGGATAGTGAAGTTTTCATTAATGACAAAAA
GACTGATAACTCAGAGATTTTCTGGAATCCAACTCCTGACATTAAACAGTGGAGATTAATAAGGCACACT
GTAAAGTTTGAAGAACAGGATGATTTCGAATCAGAGAAACTCTGGCAACGAGTGACAAAAGCTATAAATG
CCAAAGACCAAACGGAAGCTACTCAAGAAAAGTATGTTCTGGAAGAAGCTCAAAGACAAGCTGCCAGAGA
TCGAAAAACAAAAACTCAAGAGTGGGTTTGTAAGTTATTTGAACTTGACCCACTCACTGGAGAATGGCAC
TATAAGTTTTCAGATACTCGACCATGGGACCCACTTAATGATATGATACAATTTGAAAAAGATGGAGTTA
TCCAGACCAAAGTGAAACATCGCACTCCAATGGTTAGTGTTCCAAAAATGAAACATAAACCAACAAGGCA
GCAGAAGAAAGTGGTAAAAGGCTATTCTTCCCCAGAACCTGACATCCAGGATTCCTCTGGAAGTGAAGCT
CAATCTGTAAAACCAAGTACACGAAGGAAGAAGGGGATAGACCTGGGAGACATTCAGAGTTCCATTGAGT
CTATAAAGCAGACACAGGAAGAGATTAAAAGAAATATTATGGCTCTTCGAAATCATTTACTTTCAAGTAC
ACCTGCTACAGATTATTTTCTGCAACAGAAAGACTACTTCGTCATTTTCCTTCTGATTTTGCTTCAAGTC
ATAATAAACTTTATATTTAAGTAG

Translation (847 aa):
MSQRQGRDANPTPTRDLPQPSLSPASLHSQGFERGKEDISQNKDDSSLSMSKSKSESKLYNGSEKDSSTS
SKLTKKESLKVQKKNYREEKKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQ
KNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESD
GRCWMDALELALKCSSLLKRTMVREGKEHDLSISSDSTHVTLYGLLRANNLHSGDNFQLNDSEIERQHFK
DQDLYSDKSDKENDPEHDESDNEVLGKSEESDTDTSERQDDSYIDPEPVEPLKETTYMEQSHEELGEAGE
ASQTETVSEENKSLIWTLLKQVRPGMDLSRVVLPTFILEPRSFLDKLSDYYYHADFLSEAALEENPYFRL
KKVVKWYLSGFYKKPKGLKKPYNPILGETFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCL
SGSILAKSKFYGNSLSAILEGEARLTFLNRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSA
ILEFKLKPFLGSSDYVNQISGKLKLGKEVLATLEGHWDSEVFINDKKTDNSEIFWNPTPDIKQWRLIRHT
VKFEEQDDFESEKLWQRVTKAINAKDQTEATQEKYVLEEAQRQAARDRKTKTQEWVCKLFELDPLTGEWH
YKFSDTRPWDPLNDMIQFEKDGVIQTKVKHRTPMVSVPKMKHKPTRQQKKVVKGYSSPEPDIQDSSGSEA
QSVKPSTRRKKGIDLGDIQSSIESIKQTQEEIKRNIMALRNHLLSSTPATDYFLQQKDYFVIFLLILLQV
IINFIFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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