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Report for CCDS24056.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24056.1 Public Mus musculus 10 Tektip1 23 108 98 CCDS HistoryNCBI Gene:432479Re-query CCDS DB by CCDS ID:24056.1Re-query CCDS DB by GeneID:432479See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24056.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020456.4 ENSMUSP00000020456.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020456.4Link to Ensembl Protein Viewer:ENSMUSP00000020456.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000020456Re-query CCDS DB by Protein ID:ENSMUSP00000020456
Original member Current member NCBI NM_001014836.3 NP_001014836.2 Accepted alive Link to Nucleotide Sequence:NM_001014836.3Link to Protein Sequence:NP_001014836.2Re-query CCDS DB by Nucleotide ID:NM_001014836Re-query CCDS DB by Protein ID:NP_001014836Link to BLAST:NP_001014836.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001014836.2 206 A6H6Q4 206 100% 0 0

Chromosomal Locations for CCDS 24056.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81364064 81364236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81364542 81364667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81364742 81364980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81365704 81365786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGGAAAACGTGAGGCGGGAGGCTACTCGGCCCTCTGTTCCCTCAGGCACCCTTGAACTCTACTTCCCCG
ACCATCTCTACCGCAATGACTACGTGTCCCTGGAGGGGCCCCGTTGGGCGCCGGCCATCAAACAAGCCGT
GCGCTGGAAATTCACGCCCATGGGACGGGATGCGGCCGGCCAGGTGTGGTTCACCGGCCTGACCAACTCA
GAACCTGGTGATGCCTGGTACAAGCTGCCCCGTGCTCTTGACACTCCGTACCGCGAGGCCCACACGCGTT
GGCACGGCTGCTTTCAGAGTCGCCAGCGTGGCCTGCCGCCCGCCTACACACAGCACTTGCGGGAGATGGC
CTTCTGGGACCCCGCGATAACCGCGCAGTATCTCAACTCAGGCCCGCGCTGGGGGTGCATGCAGTGGAGG
GACAGGCAAATCCGTGGCAAGGAGTTCGTGGTCACCAGGAACCAGTTCGGGGCAAAGCTGCCCTGGCGGT
CCGACTATGTGCCGCTCCTGTCGCTGCCACAGCGGCCGCGCTTCACCGCGCAGGACTTCAGACAGCGGGG
CCTGCAGCGGCCCTGCCCGGCCATCGGCCAGCCTCCTCCGGCTTTCACACCCGCGCTCTGA

Translation (206 aa):
MENVRREATRPSVPSGTLELYFPDHLYRNDYVSLEGPRWAPAIKQAVRWKFTPMGRDAAGQVWFTGLTNS
EPGDAWYKLPRALDTPYREAHTRWHGCFQSRQRGLPPAYTQHLREMAFWDPAITAQYLNSGPRWGCMQWR
DRQIRGKEFVVTRNQFGAKLPWRSDYVPLLSLPQRPRFTAQDFRQRGLQRPCPAIGQPPPAFTPAL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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