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Report for CCDS23325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23325.1 Public Mus musculus 9 Aqp9 23 108 98 CCDS HistoryNCBI Gene:64008Re-query CCDS DB by CCDS ID:23325.1Re-query CCDS DB by GeneID:64008See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23325.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074465.8 ENSMUSP00000074063.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074465.8Link to Ensembl Protein Viewer:ENSMUSP00000074063.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000074465Re-query CCDS DB by Protein ID:ENSMUSP00000074063
Original member Current member EBI ENSMUST00000113570.7 ENSMUSP00000109200.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113570.7Link to Ensembl Protein Viewer:ENSMUSP00000109200.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113570Re-query CCDS DB by Protein ID:ENSMUSP00000109200
Original member Current member NCBI NM_022026.3 NP_071309.1 Accepted alive Link to Nucleotide Sequence:NM_022026.3Link to Protein Sequence:NP_071309.1Re-query CCDS DB by Nucleotide ID:NM_022026Re-query CCDS DB by Protein ID:NP_071309Link to BLAST:NP_071309.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071309.1 295 Q9JJJ3 295 100% 0 0

Chromosomal Locations for CCDS 23325.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 71112211 71112385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71122791 71123008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71130421 71130539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71132623 71132760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71138088 71138214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71162973 71163083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGCCTTCTGAGAAGGACCGAGCCAAGAAGAACCTCGTGCAGAGGCTGGCCCTGAAGAGCTGTCTGGCTA
AGGAGACACTCTCTGAGTTCCTGGGCACCTTTATAATGATTGTCCTTGGATGTGGCTCTATTGCTCAAGC
AGTCCTCAGTCGAGAAAAGGCTGGTGGGATCATCACTATCAATATTGGATTTGCAACGGCAGTTGTGATG
GCTCTTTATGCGACTTTTGGTGTCTCTGGGGGCCACATCAACCCAGCGGTGTCTTTTGCAATGTGCACCT
TTGGAAGGATGGAGTGGTTCAAGTTCCCCTTTTATGTGGGAGCTCAGCTTTTGGGAGCCTTTGTCGGGGC
TGCAACTGTCTTTGGCATTTACTATGACGGACTCATGGCCTTTGCTGATGGAAAGCTGCTCATCACGGGA
GAAAATGGAACGGCGTTCATTTTCGCGACATACCCAAAACCATTTGTATCCGTGCCAGGTGCCTTTGTAG
ACCAAGTGGTGTCTACCATGTTCCTCCTTCTGATTGTCTTTGCCATCTTTGACTCCAGAAACCTGGGGGT
CCCCAGAGGCCTGGAGCCCATTGTCATTGGCCTCCTAATCATTGTCATTTCCTGTTCTCTCGGACTCAAC
TCTGGTTGTGCCATGAACCCTGCTCGAGACCTCAGCCCCAGGCTCTTCACTGCTCTGGCAGGATGGGGAT
TTGAGGTCTTCACATTTGGAAATAACTTCTGGTGGATACCTGTCGTGGGCCCTATGATTGGAGCTGTCCT
GGGAGGTCTCATCTATGTTCTTTTTATCCAAATGCATCACTCGAACCCCGACCCAGAAGTGAAGGCAGAA
CCAGCCGAGAACAATCTAGAAAAACACGAACTCAGCGTCATCATGTAG

Translation (295 aa):
MPSEKDRAKKNLVQRLALKSCLAKETLSEFLGTFIMIVLGCGSIAQAVLSREKAGGIITINIGFATAVVM
ALYATFGVSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITG
ENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFDSRNLGVPRGLEPIVIGLLIIVISCSLGLN
SGCAMNPARDLSPRLFTALAGWGFEVFTFGNNFWWIPVVGPMIGAVLGGLIYVLFIQMHHSNPDPEVKAE
PAENNLEKHELSVIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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