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Report for CCDS23269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23269.1 Public Mus musculus 9 Map2k5 23 108 98 CCDS HistoryNCBI Gene:23938Re-query CCDS DB by CCDS ID:23269.1Re-query CCDS DB by GeneID:23938See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23269.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034920.10 ENSMUSP00000034920.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034920.10Link to Ensembl Protein Viewer:ENSMUSP00000034920.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000034920Re-query CCDS DB by Protein ID:ENSMUSP00000034920
Original member Current member NCBI NM_011840.3 NP_035970.1 Accepted alive Link to Nucleotide Sequence:NM_011840.3Link to Protein Sequence:NP_035970.1Re-query CCDS DB by Nucleotide ID:NM_011840Re-query CCDS DB by Protein ID:NP_035970Link to BLAST:NP_035970.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035970.1 448 Q9WVS7-1 448 100% 0 0

Chromosomal Locations for CCDS 23269.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 63164086 63164190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63194202 63194247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63197311 63197372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63216993 63217025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63217339 63217365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63235289 63235318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63256977 63257048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63262144 63262194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63263114 63263187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63281019 63281067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63286399 63286460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63293524 63293605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63293696 63293764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63303121 63303160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63322203 63322267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63329908 63329956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63338085 63338152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63339081 63339121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63343387 63343456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63357993 63358060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63371737 63371785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 63377123 63377257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1347 nt):
ATGCTGTGGCTGGCCCTTGGCCCCTTCTGTGCCATGGAGAACCAGGTGCTGGTGATTCGGATCAAGATTC
CAAATAGTGGCGCGGTGGACTGGACCGTGCACTCCGGGCCGCAGTTACTCTTCAGGGATGTTCTGGATGT
GATAGGCCAGGTTCTGCCTGAAGCGACGACGACAGCGTTTGAATATGAAGATGAAGATGGTGATAGGATT
ACAGTAAGAAGCGATGAAGAGATGAAGGCAATGCTGTCCTACTATTATTCCACAGTAATGGAACAGCAAG
TAAATGGCCAGCTAATAGAGCCGCTGCAGATATTTCCAAGAGCCTGCAAGCCTCCTGGGGAACGGAACAT
ACATGGCCTGAAGGTGAATACACGGGCTGGGCCATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTT
CCAAGCAATAGCTTGAAGAAGTCCTCAGCTGAACTGAGAAAGATACTGGCCAACGGCCAGATGAATGAAC
AAGACATACGGTATCGAGACACCCTTGGTCATGGCAACGGAGGCACAGTCTACAAAGCACATCATGTCCC
AAGTGGGAAAATTTTAGCTGTAAAGGTTATTCTGTTAGACATTACACTGGAGCTTCAGAAGCAGATCATG
TCTGAGCTGGAAATCCTTTATAAGTGTGACTCATCGTATATCATAGGATTTTACGGGGCATTTTTCGTAG
AAAACAGGATTTCAATTTGTACAGAATTCATGGATGGGGGGTCTTTGGATGTATATAGGAAAATTCCAGA
GCACGTCCTTGGAAGAATTGCAGTTGCAGTTGTTAAAGGCCTTACCTATCTGTGGAGTTTAAAGATTTTA
CACAGAGATGTGAAGCCCTCCAACATGCTTGTAAACACAGGCGGACAGGTCAAGCTGTGTGACTTTGGCG
TGAGCACACAGCTGGTGAATTCTATAGCCAAGACGTATGTTGGAACAAATGCTTACATGGCACCAGAAAG
AATTTCAGGAGAGCAGTATGGGATCCATTCTGACGTGTGGAGCTTAGGAATCTCTTTCATGGAGCTTGCT
CTTGGGAGGTTTCCATATCCTCAGATTCAGAAAAACCAGGGATCTTTAATGCCTCTCCAGCTTCTGCAGT
GCATTGTTGATGAGGATTCGCCGGTCCTTCCGCTTGGAGAGTTCTCGGAGCCGTTTGTACATTTCATCAC
TCAGTGCATGAGGAAGCAGCCCAAGGAGAGACCGGCGCCTGAGGAGCTGATGGGTCACCCATTCATCGTG
CAGTTCAATGATGGAAACTCCACTGTGGTGTCCATGTGGGTGTGCCGAGCTCTAGAGGAGAGGCGGAGCC
AGCAGGGACCCCCGTGA

Translation (448 aa):
MLWLALGPFCAMENQVLVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEATTTAFEYEDEDGDRI
TVRSDEEMKAMLSYYYSTVMEQQVNGQLIEPLQIFPRACKPPGERNIHGLKVNTRAGPSQHTSPVVSDSL
PSNSLKKSSAELRKILANGQMNEQDIRYRDTLGHGNGGTVYKAHHVPSGKILAVKVILLDITLELQKQIM
SELEILYKCDSSYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKIL
HRDVKPSNMLVNTGGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELA
LGRFPYPQIQKNQGSLMPLQLLQCIVDEDSPVLPLGEFSEPFVHFITQCMRKQPKERPAPEELMGHPFIV
QFNDGNSTVVSMWVCRALEERRSQQGPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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