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Report for CCDS22991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22991.1 Public Mus musculus 9 Or8b4 23 108 98 CCDS HistoryNCBI Gene:258794Re-query CCDS DB by CCDS ID:22991.1Re-query CCDS DB by GeneID:258794See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22991.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086061.3 ENSMUSP00000083228.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086061.3Link to Ensembl Protein Viewer:ENSMUSP00000083228.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000086061Re-query CCDS DB by Protein ID:ENSMUSP00000083228
Original member Current member NCBI NM_146798.2 NP_667009.1 Accepted alive Link to Nucleotide Sequence:NM_146798.2Link to Protein Sequence:NP_667009.1Re-query CCDS DB by Nucleotide ID:NM_146798Re-query CCDS DB by Protein ID:NP_667009Link to BLAST:NP_667009.1

Chromosomal Locations for CCDS 22991.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 37918644 37919588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGTCTCAGAAGAGAATGGCTCCAAGAAATAGCTCCTCTGTGACTGAATTTATCCTTGTGGGATTTTCAA
ACCAACCAGCTCTCCAGCTGCCTCTCTTCTTCGTCTTCTTAGGTATCTATGTGCTGACTGTTATAGGCAA
TTTGGGACTGATCACCTTAATTGGGTTGAATTCCAGTCTTCATACTCCAATGTACTTTTTCCTCTTCAAC
TTGTCCTTTATAGATTTCTGTTATTCCTGTGTGTTCACGCCAAAAATGTTGAGTGATTTTGTCTCAGAAA
ACATTATCTCCTACATGGGATGCATGACTCAACTGTTTTTCTTCTGTTTCTTTGTCAATTCTGAATGCTA
CGTGCTGGTGTCAATGGCCTATGATCGCTATGTGGCCATTTGCAATCCTCTGCTGTACACAGTTACCATG
TCTCCTCAGGTCTGCACTCTGCTGATGTTTTGTTCATATGTGATAGGGTTTGCTGGAGCCATGGCCCATA
CTGGAAGCATGCTGACACTTACTTTCTGTGATTCCAATATGATCCACCATTATCTCTGTGAAGTTCTTCC
CCTTTTACAGCTCTCCTGCACCAGTACCTATGCCAACGAGCTTGTGTTTTTTATTGTTGTTGGAGTAGTC
ATCACAGCATCCAGCATCAGCATCTTTATCTCTTATGCATTGATTCTCTCCAACATTCTTAAGATTCCTT
CTGCTGAAGGTAGATCCAAAGCCTTTGGCACATGTGGTTCCCATGTAGTTGCTGTTGCTCTGTTTTTTGG
GTCAGGGGCATTCACCTATTTAACAACCTCTTTCCCTGGTTCAATGGAAGAGGGAAGGTTTGCTTCAGTA
TTTTATACCAATGTGGTTCCCATGCTTAACCCACTGATCTATAGTTTGAGGAATAAAGACGTTAAACTTG
CCCTAAATAAAACCTTGAAGAGAGTGCTCTTCTGA

Translation (314 aa):
MSQKRMAPRNSSSVTEFILVGFSNQPALQLPLFFVFLGIYVLTVIGNLGLITLIGLNSSLHTPMYFFLFN
LSFIDFCYSCVFTPKMLSDFVSENIISYMGCMTQLFFFCFFVNSECYVLVSMAYDRYVAICNPLLYTVTM
SPQVCTLLMFCSYVIGFAGAMAHTGSMLTLTFCDSNMIHHYLCEVLPLLQLSCTSTYANELVFFIVVGVV
ITASSISIFISYALILSNILKIPSAEGRSKAFGTCGSHVVAVALFFGSGAFTYLTTSFPGSMEEGRFASV
FYTNVVPMLNPLIYSLRNKDVKLALNKTLKRVLF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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