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Report for CCDS22945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22945.1 Public Mus musculus 9 Adamts15 23 108 98 CCDS HistoryNCBI Gene:235130Re-query CCDS DB by CCDS ID:22945.1Re-query CCDS DB by GeneID:235130See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22945.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065112.6 ENSMUSP00000067022.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065112.6Link to Ensembl Protein Viewer:ENSMUSP00000067022.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000065112Re-query CCDS DB by Protein ID:ENSMUSP00000067022
Original member NCBI NM_001024139.1 NP_001019310.1 Updated not alive Link to Nucleotide Sequence:NM_001024139.1Link to Protein Sequence:NP_001019310.1Re-query CCDS DB by Nucleotide ID:NM_001024139Re-query CCDS DB by Protein ID:NP_001019310
Current member NCBI NM_001024139.2 NP_001019310.1 Accepted alive Link to Nucleotide Sequence:NM_001024139.2Link to Protein Sequence:NP_001019310.1Re-query CCDS DB by Nucleotide ID:NM_001024139Re-query CCDS DB by Protein ID:NP_001019310Link to BLAST:NP_001019310.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001019310.1 950 P59384 950 100% 0 0

Chromosomal Locations for CCDS 22945.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 30902015 30902789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30904481 30904656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30904760 30904941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30906061 30906238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30910598 30910881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30911110 30911277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30911681 30911813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 30921281 30922237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2853 nt):
ATGCTTCTACTGGGCATCTCAATCCTGGCTCTCGCCTGGCGACCTGCTGGCAGCTCCGAGCCAGAGTGGG
AGGTGGTCGTTCCAATCCGACGGGACCCGGACATCAATGGCCGCCACTACTACAGGAGGGGTACGGAGGA
CTCCGGGGATCAGGGTCTCATTTTTCAGATCACAGCTTTTCAGCAGGACTTTTATCTACACCTGACGCCA
GATGCCCAGTTCCTGGCTCCCGCCTTTGCTACTGAGTATCTAGGTGTCCCGCTGCAGAGGCTCACTGGCA
GCTCTCTAGACCTGCGACGCTGCTTCTATTCCGGGTATGTGAACGCGGAGCCAGACTCCTTTGCTGCTGT
GAGCCTATGCGGGGGTCTCCGCGGAGCCTTTGGCTACCGAGGTGCGGAGTATGTCATTAGCCCTCTGCCC
AACACCAGCGCGCCAGAGGCGCAGCGTCACAGCCAGGGCGCACACCTTCTCCAGCGCCGGGGTGCTCCTG
TAGGGCCTTCCGGAGACCCCACCTCTCGTTGCGGGGTGGCCTCGGGCTGGAACCCCGCCATCCTGAGGGC
TCTGGACCCTTATAAGCCACGGCGGACGGGCGCGGGGGAGAGCCACAACCGCCGCAGGTCTGGGCGCGCC
AAGCGCTTCGTGTCTATACCACGGTACGTGGAGACACTGGTGGTGGCGGACGAGTCAATGGTCAAGTTTC
ACGGCGCGGATTTGGAACATTATCTACTGACGCTGCTGGCCACGGCGGCGCGACTCTACCGCCACCCCAG
CATCCTCAACCCTATCAACATCGTGGTGGTCAAGGTGCTACTCTTAGGAGATCGTGACACTGGGCCCAAG
GTCACAGGCAACGCGGCCCTGACTCTGCGCAACTTCTGTGCCTGGCAGAAAAAGCTGAACAAAGTGAGCG
ATAAGCACCCTGAGTACTGGGACACAGCCATCCTCTTCACCAGACAGGACCTATGCGGGGCTACCACCTG
TGACACCTTGGGTATGGCTGATGTGGGCACCATGTGTGACCCCAAGAGAAGCTGCTCTGTCATTGAGGAC
GATGGGCTTCCATCAGCCTTCACCACTGCCCATGAGCTGGGCCATGTGTTCAACATGCCCCATGACAACG
TGAAGGTGTGTGAGGAGGTGTTTGGGAAGCTCAGAGCCAACCACATGATGTCTCCGACCCTCATCCAGAT
TGACCGTGCCAACCCCTGGTCAGCCTGCAGCGCTGCCATTATTACTGACTTCCTGGATAGTGGGCATGGT
GACTGCCTCCTGGACCAGCCCAGCAAGCCCATCACCCTGCCTGAGGACCTGCCGGGCACAAGCTACAGTT
TGAGCCAGCAGTGCGAGCTGGCCTTTGGGGTGGGCTCTAAGCCCTGCCCATATATGCAGTACTGTACAAA
GCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCCCTGGGCAGATGGC
ACCAGCTGTGGGGAAGGCAAGTTCTGCCTCAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTACC
GGGTGGACGGCTCTTGGGCCAAGTGGGAGCCCTACGGTTCCTGCTCCCGCACCTGCGGTGGGGGCGTGCA
GCTGGCCCGGAGGCAGTGCAGCAACCCTACCCCTGCCAACGGTGGAAAATACTGCGAGGGAGTAAGAGTG
AAATACCGATCTTGCAACTTGGAGCCCTGCCCCAGCTCAGCCTCTGGCAAGAGCTTCCGGGAAGAGCAAT
GTGAAGCTTTCAATGGCTACAACCACAGCACCAACCGGCTCACTTTAGCTGTGGCATGGGTACCCAAGTA
CTCAGGCGTGTCACCACGTGACAAGTGTAAGCTCATCTGCCGAGCCAATGGGACTGGCTACTTCTATGTA
CTAGCACCTAAGGTGGTGGATGGTACGCTGTGTACTCCTGACTCCACCTCGGTCTGTGTCCAAGGCAAGT
GCATCAAGGCTGGCTGCGACGGGAATCTGGGCTCCAAGAAGAAATTTGACAAATGTGGTGTGTGTGGTGG
AGACAATAAGAGCTGTAAGAGGGTGACAGGACTCTTCACCAAGCCTATGCACGGCTACAATTTTGTAGTG
GCCATCCCTGCCGGCGCCTCCAGCATTGATATCCGTCAGCGTGGTTACAAGGGGCTCATTGGAGATGACA
ACTACCTGGCTTTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGGCACTTTGTGGTATCCGCTGTAGA
GCGGGACCTGGTGGTAAAAGGCAGTGTGCTACGCTATAGTGGCACTGGCACTGCAGTGGAGAGCCTGCAG
GCTTCTCGACCCATCCTGGAGCCACTCACCGTGGAGGTCCTGTCGGTGGGGAAGATGACACCGCCCCGTG
TGCGTTATTCTTTCTACCTGCCCAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAAGGACCCTCGAGG
TTCCCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCT
GCGCGCTGGGTGGCAGGCAGCTGGGGACCTTGCTCAGTGAGCTGTGGCAGTGGCCTACAGAAGCGAGCAG
TGGACTGCCGGGACTCCCCAGGGCAGCAAGGAGCCTCTGCTTGTGATGTAGACCATCGGCCATTGGAGAA
GCGAGCCTGTGGGGAACCCTGCCCAACTTGGGAGCTCGGCAACTGGTCGCCCTGTTCTAAAAGCTGTGGC
CGTGGATTTAAGAGGCGTCCGCTCAAGTGTGTGGGCCACGGAGGCAGGCTGCTGGCTCGGGACCAGTGTG
ACTTACGCCGCAAGCCCCAGGAATTAGACTTCTGCGTCTTGAGACCCTGCTGA

Translation (950 aa):
MLLLGISILALAWRPAGSSEPEWEVVVPIRRDPDINGRHYYRRGTEDSGDQGLIFQITAFQQDFYLHLTP
DAQFLAPAFATEYLGVPLQRLTGSSLDLRRCFYSGYVNAEPDSFAAVSLCGGLRGAFGYRGAEYVISPLP
NTSAPEAQRHSQGAHLLQRRGAPVGPSGDPTSRCGVASGWNPAILRALDPYKPRRTGAGESHNRRRSGRA
KRFVSIPRYVETLVVADESMVKFHGADLEHYLLTLLATAARLYRHPSILNPINIVVVKVLLLGDRDTGPK
VTGNAALTLRNFCAWQKKLNKVSDKHPEYWDTAILFTRQDLCGATTCDTLGMADVGTMCDPKRSCSVIED
DGLPSAFTTAHELGHVFNMPHDNVKVCEEVFGKLRANHMMSPTLIQIDRANPWSACSAAIITDFLDSGHG
DCLLDQPSKPITLPEDLPGTSYSLSQQCELAFGVGSKPCPYMQYCTKLWCTGKAKGQMVCQTRHFPWADG
TSCGEGKFCLKGACVERHNPNKYRVDGSWAKWEPYGSCSRTCGGGVQLARRQCSNPTPANGGKYCEGVRV
KYRSCNLEPCPSSASGKSFREEQCEAFNGYNHSTNRLTLAVAWVPKYSGVSPRDKCKLICRANGTGYFYV
LAPKVVDGTLCTPDSTSVCVQGKCIKAGCDGNLGSKKKFDKCGVCGGDNKSCKRVTGLFTKPMHGYNFVV
AIPAGASSIDIRQRGYKGLIGDDNYLALKNSQGKYLLNGHFVVSAVERDLVVKGSVLRYSGTGTAVESLQ
ASRPILEPLTVEVLSVGKMTPPRVRYSFYLPKEPREDKSTRPKDPRGSPVLRNSVLSLSNQVEQPDNRPP
ARWVAGSWGPCSVSCGSGLQKRAVDCRDSPGQQGASACDVDHRPLEKRACGEPCPTWELGNWSPCSKSCG
RGFKRRPLKCVGHGGRLLARDQCDLRRKPQELDFCVLRPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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