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Report for CCDS2294.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2294.1 Public Homo sapiens 2 TFPI 24 110 108 CCDS HistoryNCBI Gene:7035Re-query CCDS DB by CCDS ID:2294.1Re-query CCDS DB by GeneID:7035See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2294.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000233156.9 ENSP00000233156.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000233156.9Link to Ensembl Protein Viewer:ENSP00000233156.3Re-query CCDS DB by Nucleotide ID:ENST00000233156Re-query CCDS DB by Protein ID:ENSP00000233156
Original member Current member EBI ENST00000392365.5 ENSP00000376172.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392365.5Link to Ensembl Protein Viewer:ENSP00000376172.1Re-query CCDS DB by Nucleotide ID:ENST00000392365Re-query CCDS DB by Protein ID:ENSP00000376172
Original member Current member NCBI NM_001329239.2 NP_001316168.1 Accepted alive Link to Nucleotide Sequence:NM_001329239.2Link to Protein Sequence:NP_001316168.1Re-query CCDS DB by Nucleotide ID:NM_001329239Re-query CCDS DB by Protein ID:NP_001316168Link to BLAST:NP_001316168.1
Original member Current member NCBI NM_001329240.2 NP_001316169.1 Accepted alive Link to Nucleotide Sequence:NM_001329240.2Link to Protein Sequence:NP_001316169.1Re-query CCDS DB by Nucleotide ID:NM_001329240Re-query CCDS DB by Protein ID:NP_001316169Link to BLAST:NP_001316169.1
Original member Current member NCBI NM_001329241.2 NP_001316170.1 Accepted alive Link to Nucleotide Sequence:NM_001329241.2Link to Protein Sequence:NP_001316170.1Re-query CCDS DB by Nucleotide ID:NM_001329241Re-query CCDS DB by Protein ID:NP_001316170Link to BLAST:NP_001316170.1
Original member Current member NCBI NM_006287.6 NP_006278.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006287.6Link to Protein Sequence:NP_006278.1Re-query CCDS DB by Nucleotide ID:NM_006287Re-query CCDS DB by Protein ID:NP_006278Link to BLAST:NP_006278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316168.1 304 P10646-1 304 100% 0 0
NP_001316169.1 304 P10646-1 304 100% 0 0
NP_001316170.1 304 P10646-1 304 100% 0 0
NP_006278.1 304 P10646-1 304 100% 0 0

Chromosomal Locations for CCDS 2294.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 187466936 187467042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 187467753 187467932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 187484124 187484216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 187484811 187484987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 187488337 187488375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 187496881 187497078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 187503648 187503768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGATTTACACAATGAAGAAAGTACATGCACTTTGGGCTTCTGTATGCCTGCTGCTTAATCTTGCCCCTG
CCCCTCTTAATGCTGATTCTGAGGAAGATGAAGAACACACAATTATCACAGATACGGAGTTGCCACCACT
GAAACTTATGCATTCATTTTGTGCATTCAAGGCGGATGATGGCCCATGTAAAGCAATCATGAAAAGATTT
TTCTTCAATATTTTCACTCGACAGTGCGAAGAATTTATATATGGGGGATGTGAAGGAAATCAGAATCGAT
TTGAAAGTCTGGAAGAGTGCAAAAAAATGTGTACAAGAGATAATGCAAACAGGATTATAAAGACAACATT
GCAACAAGAAAAGCCAGATTTCTGCTTTTTGGAAGAAGATCCTGGAATATGTCGAGGTTATATTACCAGG
TATTTTTATAACAATCAGACAAAACAGTGTGAACGTTTCAAGTATGGTGGATGCCTGGGCAATATGAACA
ATTTTGAGACACTGGAAGAATGCAAGAACATTTGTGAAGATGGTCCGAATGGTTTCCAGGTGGATAATTA
TGGAACCCAGCTCAATGCTGTGAATAACTCCCTGACTCCGCAATCAACCAAGGTTCCCAGCCTTTTTGAA
TTTCACGGTCCCTCATGGTGTCTCACTCCAGCAGACAGAGGATTGTGTCGTGCCAATGAGAACAGATTCT
ACTACAATTCAGTCATTGGGAAATGCCGCCCATTTAAGTACAGTGGATGTGGGGGAAATGAAAACAATTT
TACTTCCAAACAAGAATGTCTGAGGGCATGTAAAAAAGGTTTCATCCAAAGAATATCAAAAGGAGGCCTA
ATTAAAACCAAAAGAAAAAGAAAGAAGCAGAGAGTGAAAATAGCATATGAAGAAATTTTTGTTAAAAATA
TGTGA

Translation (304 aa):
MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADDGPCKAIMKRF
FFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQEKPDFCFLEEDPGICRGYITR
YFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPNGFQVDNYGTQLNAVNNSLTPQSTKVPSLFE
FHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKKGFIQRISKGGL
IKTKRKRKKQRVKIAYEEIFVKNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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