NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS22685.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22685.1 Public Mus musculus 8 Mon1b 23 108 98 CCDS HistoryNCBI Gene:270096Re-query CCDS DB by CCDS ID:22685.1Re-query CCDS DB by GeneID:270096See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22685.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035777.9 ENSMUSP00000045089.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035777.9Link to Ensembl Protein Viewer:ENSMUSP00000045089.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000035777Re-query CCDS DB by Protein ID:ENSMUSP00000045089
Original member Current member EBI ENSMUST00000179926.8 ENSMUSP00000137605.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179926.8Link to Ensembl Protein Viewer:ENSMUSP00000137605.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179926Re-query CCDS DB by Protein ID:ENSMUSP00000137605
Original member Current member NCBI NM_001048143.2 NP_001041608.1 Accepted alive Link to Nucleotide Sequence:NM_001048143.2Link to Protein Sequence:NP_001041608.1Re-query CCDS DB by Nucleotide ID:NM_001048143Re-query CCDS DB by Protein ID:NP_001041608Link to BLAST:NP_001041608.1
Original member Current member NCBI NM_173015.3 NP_766603.1 Accepted alive Link to Nucleotide Sequence:NM_173015.3Link to Protein Sequence:NP_766603.1Re-query CCDS DB by Nucleotide ID:NM_173015Re-query CCDS DB by Protein ID:NP_766603Link to BLAST:NP_766603.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001041608.1 553 Q8BMQ8 553 100% 0 0
NP_766603.1 553 Q8BMQ8 553 100% 0 0

Chromosomal Locations for CCDS 22685.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 113636122 113636269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 113637741 113638085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 113638535 113639354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 113639687 113639834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 113641930 113642130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1662 nt):
ATGGAGGCCGGAGGAGATAATGCTGTCCCAGCCCCCGGGGGCGTGGAGGACTTGGTGGACACGCAGTTCC
CCAGAGAGGAGGCTGGAGACAGTGAAAGGGTTCACGCAAGCACGCTGGATCCCGGAGATGGGGACCCGGA
GGACACAGGATCCAAGGACCAGCCATCCAGCCTCCTATCACCTCTGCCTCAGACTGAGGCTGCATCAAGC
ACCTGTGAGCACTGGGAAACTGCAGCAGCCTCAGACAGCAGCCCCCCCGGAGAACCTGAGAGTAACTCTG
AGGGTCAGGGAGAAGACCCCGACGATGGGGGGGACCCCAGTGACGAGGACTGGCGCAGCCAGCGGAAGCA
CGTGTTCGTGCTGAGTGAGGCAGGCAAGCCCATCTACTCACGGTACGGTAGCGTGGAGGCACTGTCGGCC
ACCATGGGGGTGATGACAGCCCTGGTGTCCTTTGTGCAGAGTGCAGGAGACGCCATCCGTGCCATCTATG
CTGAGGATCACAAGCTGGTGTTCCTGCAGCAGGGTCCACTCCTGCTCGTGGCTGTGTCCCGGACTCCACA
GTCTGCAGCACAGCTACGAGGTGAACTGCTTGCTGTACACGCCCAAATTGTGAGCACACTAACGCGTGCA
AGCGTGGCCCGCATCTTCGCACATAAGCAGAACTATGACCTCCGTCGCCTGTTGGCCGGCTCAGAGCGCA
CACTGGACCGGCTCTTGGACAGTGTGGAGCAAGACCCGGGCGCCCTGCTCCTGGGCGCTGTGCGCTGTGT
GCCTCTGGCCCGTCCACTGCGGGATGCCCTGGGCACACTACTGCGGCGCTGTACAGCCCCAGGCCTGGCC
TTGTCAGTGCTGGCTGTTGGCGGTCGACTGATAACCGTGGCCCAGGAGAGGAATGTGCTGGCGGAGTGCC
GGCTGGACCCTGCTGATCTACAGTTGCTGCTTGACTGGGTGGGTGCACCAGCCTTCGCGGCAGGTGAAGC
ATGGGCACCTGTGTGCCTGCCTCGCTTTAACCCAGATGGTTTCTTCTATGCCTATGTGGCCCGCCTGGAT
TCCATGCCCGTCTGCCTGCTGCTGCTTGGTACCAACCGTGAAGCCTTCCATGCCATGGCCGCCTGCCGGC
GCTTAGTTGAAGATGGGATGCACAACCTTGGTGCCCTGCGTACTCTTGGGGAGGCTGCCAACTTCTCTAA
TGGCCCAGCAGCCAGTGCCCCAGCCTACAGTGTGCAGGCTGTGGGAGCCCCTGGCCTCCGGCATTTTCTC
TATAAGCCACTGGATATCCCTGAACAACACCGCCAGCTGCCACAGTTTACCAGTCCCGAGCTAGAGGCCC
CATACAGCAGAGAGGAAGAGCGACAGCGACTGTCAGACTTGTATCACCGCCTGCATGCTCGCCTCCACAG
CACCTCCCGGCCCCTGCGCCTCATTTACCACGTGGCTGAGAAAGAGACGCTGCTGGCTTGGGTGACTTCC
AAGTTTGAGCTCTATACTTGCCTCAGCCCCCTGGTAACCAAGGCTGGTGCCATCTTAGTAGTGACGAAGC
TCTTGCGCTGGGTAAGGAAGGAAGAGGACCGGCTTTTCATCCGTTACCCACCCAAATACTCCACACCCCC
ATCCACCTCGGCGGACCAGGCCCCCAACAATGGCTTGTTCACAGGACTCTGA

Translation (553 aa):
MEAGGDNAVPAPGGVEDLVDTQFPREEAGDSERVHASTLDPGDGDPEDTGSKDQPSSLLSPLPQTEAASS
TCEHWETAAASDSSPPGEPESNSEGQGEDPDDGGDPSDEDWRSQRKHVFVLSEAGKPIYSRYGSVEALSA
TMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAVSRTPQSAAQLRGELLAVHAQIVSTLTRA
SVARIFAHKQNYDLRRLLAGSERTLDRLLDSVEQDPGALLLGAVRCVPLARPLRDALGTLLRRCTAPGLA
LSVLAVGGRLITVAQERNVLAECRLDPADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLD
SMPVCLLLLGTNREAFHAMAACRRLVEDGMHNLGALRTLGEAANFSNGPAASAPAYSVQAVGAPGLRHFL
YKPLDIPEQHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTS
KFELYTCLSPLVTKAGAILVVTKLLRWVRKEEDRLFIRYPPKYSTPPSTSADQAPNNGLFTGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH