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Report for CCDS22449.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22449.1 Public Mus musculus 8 Ucp1 23 108 98 CCDS HistoryNCBI Gene:22227Re-query CCDS DB by CCDS ID:22449.1Re-query CCDS DB by GeneID:22227See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22449.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034146.4 ENSMUSP00000034146.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034146.4Link to Ensembl Protein Viewer:ENSMUSP00000034146.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000034146Re-query CCDS DB by Protein ID:ENSMUSP00000034146
Original member Current member NCBI NM_009463.3 NP_033489.1 Accepted alive Link to Nucleotide Sequence:NM_009463.3Link to Protein Sequence:NP_033489.1Re-query CCDS DB by Nucleotide ID:NM_009463Re-query CCDS DB by Protein ID:NP_033489Link to BLAST:NP_033489.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033489.1 307 P12242 307 100% 0 0

Chromosomal Locations for CCDS 22449.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 83290583 83290708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83291402 83291600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83293888 83294088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83294183 83294284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83295169 83295349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83297857 83297971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGTGAACCCGACAACTTCCGAAGTGCAACCCACCATGGGGGTCAAGATCTTCTCAGCCGGAGTTTCAG
CTTGCCTGGCAGATATCATCACCTTCCCGCTGGACACTGCCAAAGTCCGCCTTCAGATCCAAGGTGAAGG
CCAGGCTTCCAGTACCATTAGGTATAAAGGTGTCCTAGGGACCATCACCACCCTGGCAAAAACAGAAGGA
TTGCCGAAACTGTACAGCGGTCTGCCTGCGGGCATTCAGAGGCAAATCAGCTTTGCCTCACTCAGGATTG
GCCTCTACGACTCAGTCCAAGAGTACTTCTCTTCAGGGAGAGAAACACCTGCCTCTCTCGGAAACAAGAT
CTCAGCCGGCTTAATGACTGGAGGTGTGGCAGTGTTCATTGGGCAGCCTACAGAGGTCGTGAAGGTCAGA
ATGCAAGCCCAGAGCCATCTGCATGGGATCAAACCCCGCTACACGGGGACCTACAATGCTTACAGAGTTA
TAGCCACCACAGAAAGCTTGTCAACACTTTGGAAAGGGACGACCCCTAATCTAATGAGAAATGTCATCAT
CAATTGTACAGAGCTGGTAACATATGACCTCATGAAGGGGGCCCTTGTAAACAACAAAATACTGGCAGAT
GACGTCCCCTGCCATTTACTGTCAGCTCTTGTTGCCGGGTTTTGCACCACACTCCTGGCCTCTCCAGTGG
ATGTGGTAAAAACAAGATTCATCAACTCTCTGCCAGGACAGTACCCAAGCGTACCAAGCTGTGCGATGTC
CATGTACACCAAGGAAGGACCGACGGCCTTTTTCAAAGGGTTTGTGGCTTCTTTTCTGCGACTCGGGTCC
TGGAACGTCATCATGTTTGTGTGCTTTGAACAGCTGAAAAAAGAGCTGATGAAGTCCAGACAGACAGTGG
ATTGTACCACATAA

Translation (307 aa):
MVNPTTSEVQPTMGVKIFSAGVSACLADIITFPLDTAKVRLQIQGEGQASSTIRYKGVLGTITTLAKTEG
LPKLYSGLPAGIQRQISFASLRIGLYDSVQEYFSSGRETPASLGNKISAGLMTGGVAVFIGQPTEVVKVR
MQAQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDLMKGALVNNKILAD
DVPCHLLSALVAGFCTTLLASPVDVVKTRFINSLPGQYPSVPSCAMSMYTKEGPTAFFKGFVASFLRLGS
WNVIMFVCFEQLKKELMKSRQTVDCTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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