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Report for CCDS22447.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22447.1 Public Mus musculus 8 Zfp330 23 108 98 CCDS HistoryNCBI Gene:30932Re-query CCDS DB by CCDS ID:22447.1Re-query CCDS DB by GeneID:30932See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22447.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034147.3 ENSMUSP00000034147.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034147.3Link to Ensembl Protein Viewer:ENSMUSP00000034147.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000034147Re-query CCDS DB by Protein ID:ENSMUSP00000034147
Original member Current member NCBI NM_145600.2 NP_663575.1 Accepted alive Link to Nucleotide Sequence:NM_145600.2Link to Protein Sequence:NP_663575.1Re-query CCDS DB by Nucleotide ID:NM_145600Re-query CCDS DB by Protein ID:NP_663575Link to BLAST:NP_663575.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663575.1 316 Q922H9-1 316 100% 0 0

Chromosomal Locations for CCDS 22447.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 82764229 82764491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82764855 82764972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82766012 82766058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82766669 82766773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82767213 82767339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82769320 82769399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82770801 82770871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82771339 82771358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 82772880 82772999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGCCGAAGAAAAAGACCGGTGCGAGGAAGAAGGCAGAGAACCGCCGAGAACGCGAGAAACAACTGCGAG
CATCAAGAAGTACTGTCGACCTAGCCAAACACCCATGCAATGCTTCAATGGAATGCGACAAATGTCAGAG
GCGGCAGAAGAATAGAGCATTTTGCTATTTTTGTAATTCTGTTCAGAAGTTACCAATTTGTGCACAGTGT
GGGAAAACAAAGTGTATGATGAAGTCGTCAGACTGTGTTATCAAGCATGCTGGTGTGTACAGTACTGGCC
TTGCTATGGTGGGTGCAATATGTGACTTCTGCGAAGCTTGGGTTTGCCATGGGAGGAAGTGTCTTAGCAC
CCATGCCTGTGCCTGCCCACTCACAGATGCAGAGTGTGTGGAATGTGAGCGAGGGGTATGGGACCATGGA
GGAAGAATATTCAGCTGTTCGTTTTGCCATAATTTTCTCTGTGAAGATGACCAGTTTGAGCATCAAGCCA
GCTGCCAAGTTTTAGAAGCAGAAACATTTAAATGTGTTTCCTGCAATCGACTTGGCCAGCATTCATGTCT
CCGCTGTAAGGCTTGTTTCTGTGATGAACATACAAGGAGCAAAGTGTTTAAGCAAGAAAAAGGAAAACAA
CCTCCTTGCCCTAAATGTGGGCATGAAACACAGGAGACAAAGGATCTTAGCATGTCAACACGCTCCTTGA
AATTTGGCAGGCAGACTGGAGGAGAAGAAGATGGAGCCTCAGGGTATGATGCTTACTGGAAGAACCTGTC
GTCGGACAAGTATGGAGATACTGGATACCATGATGATGATGAGGAGGAGGATGAAGCAGAGGATGAAGAG
GAAGAAGATGGGAAGGACTCAGATGCTGAGTCATCAGATCTGTTCAATAACTTGAATTTAGGAAGGACCT
ATGCCAGTGGCTACGCTCACTACGAGGAGCAGGAGAGCTAG

Translation (316 aa):
MPKKKTGARKKAENRREREKQLRASRSTVDLAKHPCNASMECDKCQRRQKNRAFCYFCNSVQKLPICAQC
GKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDHG
GRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNRLGQHSCLRCKACFCDEHTRSKVFKQEKGKQ
PPCPKCGHETQETKDLSMSTRSLKFGRQTGGEEDGASGYDAYWKNLSSDKYGDTGYHDDDEEEDEAEDEE
EEDGKDSDAESSDLFNNLNLGRTYASGYAHYEEQES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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