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Report for CCDS22354.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22354.1 Public Mus musculus 8 Tssk6 23 108 98 CCDS HistoryNCBI Gene:83984Re-query CCDS DB by CCDS ID:22354.1Re-query CCDS DB by GeneID:83984See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22354.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050373.6 ENSMUSP00000062783.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050373.6Link to Ensembl Protein Viewer:ENSMUSP00000062783.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000050373Re-query CCDS DB by Protein ID:ENSMUSP00000062783
Original member Current member NCBI NM_032004.2 NP_114393.1 Accepted alive Link to Nucleotide Sequence:NM_032004.2Link to Protein Sequence:NP_114393.1Re-query CCDS DB by Nucleotide ID:NM_032004Re-query CCDS DB by Protein ID:NP_114393Link to BLAST:NP_114393.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114393.1 273 Q925K9 273 100% 0 0

Chromosomal Locations for CCDS 22354.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 69902308 69903129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGTCGGGCGACAAACTCCTGAGCGAACTTGGCTATAAGCTGGGCCGCACGATAGGTGAGGGCAGCTACT
CCAAGGTGAAAGTGGCCACCTCCAAGAAGTATAAAGGGACGGTGGCCATCAAGGTGGTGGACCGCCGGCG
AGCGCCTCCGGACTTCGTCAACAAGTTCCTGCCTCGAGAGCTGTCCATCCTGCGGGGAGTACGGCACCCG
CACATCGTACACGTTTTCGAGTTCATCGAAGTGTGCAATGGGAAGCTGTACATCGTGATGGAGGCAGCAG
CCACCGACCTGCTGCAGGCAGTGCAGCGCAACGGGCGCATCCCGGGGTCGCAGGCGCGCGAACTCTTCTC
GCAGATCGCGGGCGCCGTGCGCTACCTGCACGACCACCACCTGGTGCACCGCGACCTCAAGTGCGAAAAC
GTGCTGCTAAGCCCTGACGAGCGCCGCGTCAAGATCACGGATTTCGGTTTCGGCCGCCAGGCGCACGGCT
ACCCAGACCTGAGCACCACCTACTGCGGCTCGGCCGCGTATGCGTCACCTGAGGTGCTCCTGGGCATCCC
CTACGACCCTAAGAAATACGACGTGTGGAGCCTGGGCGTTGTGCTCTACGTCATGGTCACCGGGTGCATG
CCCTTCGACGACTCGGACATTGCTGGCCTACCCCGGCGCCAGAAGCGCGGCGTGCTCTACCCTGACGGCC
TCGAACTGTCGGAACGATGCAAATCCTTGATCGCCGAGCTGCTACAGTTCAGCCCGTCTGCCCGGCCCTC
GGCGGGCCAGGTGGCGCGCAATGGCTGGCTGCGGGCCGGGGACTCCGGCTAG

Translation (273 aa):
MSGDKLLSELGYKLGRTIGEGSYSKVKVATSKKYKGTVAIKVVDRRRAPPDFVNKFLPRELSILRGVRHP
HIVHVFEFIEVCNGKLYIVMEAAATDLLQAVQRNGRIPGSQARELFSQIAGAVRYLHDHHLVHRDLKCEN
VLLSPDERRVKITDFGFGRQAHGYPDLSTTYCGSAAYASPEVLLGIPYDPKKYDVWSLGVVLYVMVTGCM
PFDDSDIAGLPRRQKRGVLYPDGLELSERCKSLIAELLQFSPSARPSAGQVARNGWLRAGDSG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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